LOCUS       NM_001134421            1480 bp    mRNA    linear   ROD 07-OCT-2023
DEFINITION  Rattus norvegicus similar to human chromosome 16 open reading frame
            87 (C19h16orf87), mRNA.
ACCESSION   NM_001134421 XM_001068411 XM_214649
VERSION     NM_001134421.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1480)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC167107.1.
            
            On or before Aug 29, 2008 this sequence version replaced
            XM_214649.3, XM_001068411.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC167107.1, FQ235280.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19p11"
     gene            1..1480
                     /gene="C19h16orf87"
                     /gene_synonym="RGD1308706"
                     /note="similar to human chromosome 16 open reading frame
                     87"
                     /db_xref="GeneID:291925"
                     /db_xref="RGD:1308706"
     exon            1..150
                     /gene="C19h16orf87"
                     /gene_synonym="RGD1308706"
                     /inference="alignment:Splign:2.1.0"
     CDS             85..549
                     /gene="C19h16orf87"
                     /gene_synonym="RGD1308706"
                     /codon_start=1
                     /product="UPF0547 protein C16orf87 homolog"
                     /protein_id="NP_001127893.1"
                     /db_xref="GeneID:291925"
                     /db_xref="RGD:1308706"
                     /translation="MSATRAKKVKMATKSCPECDQQIPVACKSCPCGYIFISRKLLNA
                     KHSEKSPPSTENKHEAKRRRTERVRREKINSTVNKDLENRKRSRSNSHSDHIRRGRGR
                     PKSSSAKKHEEEREKQEKEIDIYANLSDEKAFVFSVALAEINRKIINQRLIL"
     exon            151..247
                     /gene="C19h16orf87"
                     /gene_synonym="RGD1308706"
                     /inference="alignment:Splign:2.1.0"
     exon            248..430
                     /gene="C19h16orf87"
                     /gene_synonym="RGD1308706"
                     /inference="alignment:Splign:2.1.0"
     exon            431..1454
                     /gene="C19h16orf87"
                     /gene_synonym="RGD1308706"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccgggtcg cggctggagt gaggacgcgc tgtgtggagc agcggagcca aggcgctgct
       61 tccacagctg ctcaggaggg gagcatgtct gcaactcgag ccaagaaagt gaagatggcc
      121 accaaatcgt gcccggagtg cgaccaacag attcctgttg cgtgtaaatc atgtccctgt
      181 ggttatatat ttattagcag aaaactacta aatgcaaaac actcagagaa atcaccaccg
      241 tctacagaaa acaagcatga ggccaagagg aggcgaacag agagagtcag gcgagagaag
      301 ataaattcta cagtaaataa agatttagaa aacagaaaga gatctcgaag taacagccat
      361 tcagatcata tcagacgagg aagaggaaga cctaaaagtt catccgccaa aaaacacgag
      421 gaagagagag aaaaacagga gaaggaaatt gacatctatg ctaacctctc tgatgagaag
      481 gctttcgtgt tttcagttgc cttggcagaa ataaatagaa aaattatcaa tcaaagactt
      541 attctctgat atttgtcttc agaatctgtc gccactttct tcaggatgat gtcagcagat
      601 gctcagacag tcgtggactc tcagactgtg tgagcgaggg ccactgttgc ttctctctgt
      661 tttctagtct gttgccacac ttagggagcc aagctgcggg cttagactct gctgggattt
      721 cctgtttacc aaggattatt atcagtgttc tgtgttggga tttactaagt gtatttacaa
      781 aaacaaacaa gcaaaactac cccaaaagcc ctggcaactg gatggatatt tacagaggaa
      841 gggtggggga taggagtgtg gtggaagaca cagccagagc agcagacatg cttggtggtt
      901 ttcaggtctg caccagagag gcagtgtctt aagtcctgtc aggagagtga cttttaaatg
      961 tatgtattac aggctttcac cattaacaga tgcatatata cagtccattg acttttaata
     1021 cgttggtaat tgatatttta ttgaatggag aattacgaat atagattata aattctgtct
     1081 ttaattaacc tttttcttgg gcgctatttt aatgatttaa ggtaggagtt atattttcag
     1141 aaactttcta gacagtttgg aaatttgggt gctatatgaa gaaaagcatt taaggctgta
     1201 tcatatttca aatataaaca ccttgttttc ttgaatgttt atttattggt tttaaaaaac
     1261 tttgctgtta tcaagatggt gcctgttaac ctaaacacag atatatttat tatataaatt
     1321 gcaaaatatt tcttagctac ttgtgaacag tgatgttttg tctgaatgaa tgtttcattt
     1381 atacgtaatt ctggtaatta tttaaactgt tacttcatcc tggaaaaaaa aataaacctt
     1441 aatattgaaa gtgaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
