LOCUS       XM_006246412            1843 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to L-amino acid oxidase 1
            (RGD1308564), mRNA.
ACCESSION   XM_006246412
VERSION     XM_006246412.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006246412.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006246412.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1843
                     /gene="RGD1308564"
                     /note="similar to L-amino acid oxidase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 97% coverage of the annotated genomic
                     feature by RNAseq alignments, including 31 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:287305"
                     /db_xref="RGD:1308564"
     CDS             1..1611
                     /gene="RGD1308564"
                     /codon_start=1
                     /product="L-amino-acid oxidase"
                     /protein_id="XP_006246474.1"
                     /db_xref="GeneID:287305"
                     /db_xref="RGD:1308564"
                     /translation="MLSVPGRPLAMFPGWLALIFLSVLSLNTQAFNSKLVKCFEDPQY
                     EELLQLARNGLGQTAERKQVVVIGAGMAGLTAAKILQDAGHQVTVLEASGRVGGRIET
                     HRVPGAHWYIELGAMRIPINHRFSHELIKRFGLMLKEFCPCNNQTWVLVNGVRQRSGA
                     VQADPGLLGYSVKADEMGKTAEQLFDASLRKIVEELKNSSCQEVLEKYDSFSTKEYLI
                     KVGNLSRGAVQMIGDMLNTDSGYYEAFTETLRGIISFFQEPRFDEIVGGFDQLPQALH
                     NSLLPGTVWFYSPAEEVERSGDYVHVTYKTPDPLQPRARLTADFVVVATTAKAARLLR
                     FQPPLSLSKQDALRSVHYNSATKVILACKQRFWERDGIFSGKSTTDRPSRFIYYPNHI
                     FPNGAGVILASYTLDDDSVFLTALDHSRVVDIVLDDLAAIHNRPKEELRDLCPYSAIK
                     NWSQDPYSMGGFAFFTPYQYVDYAQELSQPEGPVFFAGEHTDLPHGWIDTAIKSGLRV
                     ARNIQESVNLALTRNPRNIKGHFSKSEL"
ORIGIN      
        1 atgctatcag tcccaggcag gcctctagct atgttcccag gctggctggc tctcatcttc
       61 ctgtccgtgc tgagcttgaa tactcaggcc ttcaacagca agcttgtcaa gtgctttgag
      121 gatccccagt atgaagagct actgcagctg gctcggaatg gactggggca gacagccgag
      181 aggaagcaag tggtggtgat tggggcaggc atggctggac tcactgctgc caagatcttg
      241 caggatgctg gccaccaggt gactgtcctg gaggcctcag gacgtgtagg tggcagaatc
      301 gagactcacc gagtccctgg agcgcactgg tacatagagc tgggcgccat gaggatccct
      361 atcaaccaca ggttttctca tgagctcatc aaaagattcg ggctgatgct aaaggaattc
      421 tgcccttgca acaatcagac ctgggtgctg gtcaatggag ttcggcagcg ctcgggggca
      481 gtgcaggccg accctggcct gctgggttac tcagtcaaag ctgatgagat ggggaagaca
      541 gcagaacagc tctttgatgc atctctgaga aagattgtgg aagagctgaa gaacagcagt
      601 tgccaggagg tcctggagaa gtatgactcc ttctccacca aggagtacct gatcaaggtg
      661 gggaacctga gccgaggggc cgtgcagatg atcggcgaca tgctgaacac agactccggt
      721 tactatgagg cctttaccga gaccctacgt ggcatcatct cctttttcca agagccccgg
      781 ttcgatgaaa tcgttggagg ctttgaccaa ctcccccagg ccctgcacaa ttctctgctc
      841 ccagggactg tctggttcta ctcaccagca gaagaagtag agaggtctgg agactatgtt
      901 catgtcacct acaagacacc tgaccctctg cagcccaggg cgcggctgac tgcggatttt
      961 gtggtggtgg ccaccactgc taaggctgcc cgcctcctta gattccagcc acctctctct
     1021 cttagcaaac aggatgctct gcgttctgtc cactacaata gtgccaccaa agtgatcctg
     1081 gcctgcaaac agcgtttctg ggaacgagac ggcattttca gtggcaaatc taccaccgac
     1141 cggccttccc gtttcatcta ctatcccaac cacatcttcc ccaatggtgc gggggtcatc
     1201 ctggcatcgt acaccctgga tgatgactct gtgttcttga cagccctgga ccacagtcgg
     1261 gtagtggaca ttgttctgga tgacctagct gctattcaca atcgccccaa agaagaactc
     1321 cgtgatctct gtccttactc cgcaatcaag aactggagcc aagatcctta ttccatgggt
     1381 ggctttgcct tcttcacccc ctaccaatat gtggactatg cccaggaact cagccagccg
     1441 gaagggccgg tcttcttcgc gggtgaacac acagatctgc cccatggctg gatcgacact
     1501 gctatcaagt caggactcag ggtggcaagg aacattcagg aatctgtgaa cttggctttg
     1561 acaaggaacc ccagaaatat aaaaggacac ttctccaaaa gtgaactgta aacaattata
     1621 tgggccctga gaactcgggg gattccaaac aagtttgtcc atcaggacac aatacaaaac
     1681 ctactctcac ccatctttgc cttcgctcag aaactttacc tgaggcccat gactggagga
     1741 gccttgaggt aacagactac ctgtgacctt ggttttatga caggggctca gcaagaactt
     1801 gtggcataga gattaaaaac aataaagttg aattcaacta tca
//
