LOCUS       NM_001106854            2599 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus similar to human chromosome 3 open reading frame
            18 (C8h3orf18), mRNA.
ACCESSION   NM_001106854 XM_001074201 XM_236620
VERSION     NM_001106854.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            [WARNING] On Oct 8, 2024 this sequence was replaced by
            NM_001106854.3.
            
            On Nov 27, 2020 this sequence version replaced NM_001106854.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ224195.1, SRR26643299.37024.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-161               JAXUCZ010000008.1  116891310-116891470
            162-281             JAXUCZ010000008.1  116891999-116892118
            282-658             JAXUCZ010000008.1  116892913-116893289
            659-684             JAXUCZ010000008.1  116897057-116897082
            685-832             JAXUCZ010000008.1  116897677-116897824
            833-2599            JAXUCZ010000008.1  116898943-116900709
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..2599
                     /gene="C8h3orf18"
                     /gene_synonym="RGD1307461"
                     /note="similar to human chromosome 3 open reading frame
                     18"
                     /db_xref="GeneID:300990"
                     /db_xref="RGD:1307461"
     exon            1..161
                     /gene="C8h3orf18"
                     /gene_synonym="RGD1307461"
                     /inference="alignment:Splign:2.1.0"
     exon            162..281
                     /gene="C8h3orf18"
                     /gene_synonym="RGD1307461"
                     /inference="alignment:Splign:2.1.0"
     exon            282..658
                     /gene="C8h3orf18"
                     /gene_synonym="RGD1307461"
                     /inference="alignment:Splign:2.1.0"
     CDS             425..913
                     /gene="C8h3orf18"
                     /gene_synonym="RGD1307461"
                     /codon_start=1
                     /product="uncharacterized protein C3orf18 homolog"
                     /protein_id="NP_001100324.1"
                     /db_xref="GeneID:300990"
                     /db_xref="RGD:1307461"
                     /translation="MNSRVPATQSWFSSHPPTTEPDLEPATEGSTTETATLSPETTSF
                     NDTRMPDMAGGTAGVGTMLLSFGIITVIGLAVAMVLYIRKKKRLEKLRHQLMPMYNFD
                     PTEEQDELEQELLEHGRDAASLQAAASLQATQGKSTLPSQGPLQRPSRLVFTDVANAI
                     HA"
     exon            659..684
                     /gene="C8h3orf18"
                     /gene_synonym="RGD1307461"
                     /inference="alignment:Splign:2.1.0"
     exon            685..832
                     /gene="C8h3orf18"
                     /gene_synonym="RGD1307461"
                     /inference="alignment:Splign:2.1.0"
     exon            833..2599
                     /gene="C8h3orf18"
                     /gene_synonym="RGD1307461"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 taatactagc tgattcctgc tcgctcgcaa ggcggacctt acttgagtcc gacctgtcgc
       61 cccctacgcc cgggcctggg tgttccccgc gcccacgcct cctgcccgtc gctaccaccc
      121 ttagcttctc agactgagct cggcgccccg gagaggatta agtctgcccc ttctgcagca
      181 cggctaagac tcatccccac cccgctttac ccaagaccca cagaagctgt gtgatctccc
      241 atcctctgct tccaaaatag gagggaaata ggtgtttcaa aaactgagaa aggcaggggt
      301 ctcctggtaa gaatttggct gtgccagtgg tcgtcaccgt ggtgggaacg acagccttgg
      361 acactcctag catcagaaat cagtgggcaa gttgactgag cactggctgt ctcccagcat
      421 cagcatgaac tccagggtcc cagctactca gagctggttc agcagccacc cgcccaccac
      481 tgagcctgac ttggagcctg ccaccgaagg ctctaccaca gagaccgcca ccctcagccc
      541 cgaaaccaca agcttcaatg acaccagaat gcctgatatg gcaggcggta cagctggtgt
      601 gggtaccatg cttctgtctt ttgggatcat cacagtgatt ggtctggctg tggccatggt
      661 tttatacatc aggaagaaga agaggctgga gaagttacgc caccagctca tgcctatgta
      721 caactttgac cccacggagg agcaagacga actggagcag gaactactgg agcacggacg
      781 agatgcagcc tccctgcagg ctgctgcctc cctgcaggcc acacagggca agagcactct
      841 cccttcccag ggcccactgc agaggcccag taggctggtg tttaccgacg tagccaatgc
      901 catccacgcg tgagaggccc gagaacaagc ctggacctct tacaaaagac aactgccacg
      961 gtgccggcag cgctgcccac ttcctgactg tcaagaccta ttctcaggac cagagccatc
     1021 accaccactg aagccggaaa gggctgcgac agaccccagc tgtgctgaga ccccgcccac
     1081 tgactctcaa gctctcggag agagtcctga ccaggctagt catctggcca ctgacttctg
     1141 aacccatggc tctggcacag aaggcagcct ttatgcagga agacaagagc cactgccggt
     1201 ttcctggtct ctggtatccc ttgcatcaag gtctgcttct ctgatggggc ggaagagcac
     1261 aagcttgaag gggagtgact tttttttttt taagctgtag ccttttctag ggtagagaga
     1321 gaggcaaaca gccagatgac tgggacaggg cagggcactt tttttgttta tttgttttgt
     1381 tttgttttgt tttgtgggtg tggggagggg aggaagagtt cattttattt tactttcgag
     1441 acagggtctt ggctagcctg gaagttgtag accaggctgg cctccgactc atagagatct
     1501 acctgcgtct acctctttga gtgctgggat tagaggcatg tgcctccaca tgcagctaga
     1561 gcaacaccat ttataagtcc aagaggccca gggagagagc cggaaatgcc cagtagatgg
     1621 cccgggaaga tattacggtg aatgggtaag catgaggcct cccagaggtc tctgccacat
     1681 ccctggcagc caaggtagct gctgaggaag atgaaattgg gagactgggt atggaaagat
     1741 gcaactcccc gagatgtggg gagtggccgc acacagacag gtacctgttt catcatgaga
     1801 gtgagacaga ggctctctgc attggctcca ccttgcaagc taattcccac ccaatgatag
     1861 ggaggggagc attagcacag gctgcctcct ctccgtcaat gctcagggct acaccacgga
     1921 agcgaggaac tacgctgggt tcctctgttc accatgtttc ttcagcaggc tccaaaagct
     1981 gggcacacct gcttccggaa atggctccct tcctataagg gcttctggga gatgctgctg
     2041 gcctaaaggt ggtcacaggc cagaagcttg taggaaaact atggttaccc gaaagggagt
     2101 gtcctttgag gaaaagcccc aaggaagtga gtctgatttt agcttttctc ttccactgta
     2161 tctgcaggaa gggccactca gagttcatgg aatatagaat agagtctctg tgttggcctt
     2221 ccctcgaagt cttgaaggtg caggactgac accaggggca tctgggcaga gtagaccaca
     2281 aagacagggc gtttttttct acactaggac aaaggaactc tgagcatgca cggagtcgtg
     2341 tccccaactt cactgtcatc ccctggttag aggggatgtg ggggtggaca tgtgctttgg
     2401 gcagatatca catgtcagga ggtgaggggc taggaggatc cctcagggaa ggttctggtt
     2461 ttattcctgc ctctggctgc tataaatatg ttcgcactcc agcaactgga aagctgtgag
     2521 taatttagga tgcacaaagc tgtaatttaa ctccagcatc tcactgtgcg agagcattaa
     2581 agatgtaatt aagatgttt
//
