LOCUS       NM_001402543             673 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus Rho GTPase activating protein 20 like 1
            (Arhgap20l1), mRNA.
ACCESSION   NM_001402543 XM_039103833
VERSION     NM_001402543.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Mar 17, 2022 this sequence version replaced XM_039103833.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.95961.1,
                                           SRR26360181.2870641.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-114               JAXUCZ010000002.1  215524040-215524153 c
            115-299             JAXUCZ010000002.1  215522624-215522808 c
            300-449             JAXUCZ010000002.1  215521281-215521430 c
            450-491             JAXUCZ010000002.1  215518061-215518102 c
            492-586             JAXUCZ010000002.1  215517351-215517445 c
            587-673             JAXUCZ010000002.1  215515868-215515954 c
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q42"
     gene            1..673
                     /gene="Arhgap20l1"
                     /gene_synonym="RGD1306704"
                     /note="Rho GTPase activating protein 20 like 1"
                     /db_xref="GeneID:295483"
                     /db_xref="RGD:1306704"
     exon            1..114
                     /gene="Arhgap20l1"
                     /gene_synonym="RGD1306704"
                     /inference="alignment:Splign:2.1.0"
     exon            115..299
                     /gene="Arhgap20l1"
                     /gene_synonym="RGD1306704"
                     /inference="alignment:Splign:2.1.0"
     CDS             151..588
                     /gene="Arhgap20l1"
                     /gene_synonym="RGD1306704"
                     /note="rho GTPase-activating protein 20-like"
                     /codon_start=1
                     /product="hypothetical LOC295483"
                     /protein_id="NP_001389472.1"
                     /db_xref="GeneID:295483"
                     /db_xref="RGD:1306704"
                     /translation="METHGEKATLFHGVRGSLLLEGPVEFRRGWRKKKRHLFLLNDLL
                     VVSNNVHKKKFKIKYIIPLSYLWICDYADLVGGDNRTASKSIFLCWPMENFVATFCTK
                     EQKKWWWFFLQRYINEAKMNGESKSAALQMVTEDIRRCTSACA"
     exon            300..449
                     /gene="Arhgap20l1"
                     /gene_synonym="RGD1306704"
                     /inference="alignment:Splign:2.1.0"
     exon            450..491
                     /gene="Arhgap20l1"
                     /gene_synonym="RGD1306704"
                     /inference="alignment:Splign:2.1.0"
     exon            492..586
                     /gene="Arhgap20l1"
                     /gene_synonym="RGD1306704"
                     /inference="alignment:Splign:2.1.0"
     exon            587..673
                     /gene="Arhgap20l1"
                     /gene_synonym="RGD1306704"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acacttcagc agttggtctg ccaactgctg tagttgtctt tgatgtttag tgccaaggaa
       61 gaagtagagt ttcaagtcct ttgaaagact acccggtcca ggatccctgt gaagtgtttg
      121 gcctgtacca ggaaaaagct ttctcctcac atggaaaccc acggtgagaa agcgacacta
      181 tttcatggcg tacgtggaag cttgctgctc gaagggcccg tggaattcag aagaggctgg
      241 aggaaaaaga agcgccatct cttcttgttg aatgatcttt tggttgtgtc taataatgta
      301 cacaagaaga agtttaagat aaaatatatc atcccactga gttacctctg gatttgtgac
      361 tatgcagacc ttgtgggagg agacaacagg actgcctcca agtccatctt cctttgctgg
      421 cccatggaaa attttgtggc caccttctgt accaaggaac agaaaaaatg gtggtggttt
      481 ttcctccaaa gatacatcaa tgaggccaag atgaatggcg agagtaagag tgctgcactg
      541 cagatggtca cagaggacat ccgacgctgc accagcgcat gcgcctagac atctgctgct
      601 gtctttgccc aatccagagg aagactccca tttattccct ccaggataaa taaaatatta
      661 tttgtgttga gaa
//
