LOCUS       XM_056985276            2538 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to T-cell activation Rho
            GTPase-activating protein isoform b (RGD1306519), transcript
            variant X1, mRNA.
ACCESSION   XM_056985276
VERSION     XM_056985276.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_056985276.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2538
                     /gene="RGD1306519"
                     /note="similar to T-cell activation Rho GTPase-activating
                     protein isoform b; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:295437"
                     /db_xref="RGD:1306519"
     CDS             128..2110
                     /gene="RGD1306519"
                     /codon_start=1
                     /product="rho GTPase-activating protein 20 isoform X1"
                     /protein_id="XP_056841256.1"
                     /db_xref="GeneID:295437"
                     /db_xref="RGD:1306519"
                     /translation="MVMSNLQGTSGPQGSGNCSDVPNLPGQCVEHLSPDAQEQFIPKP
                     RDQSGSQQQRDSEKKKVKKRWSFITRIFHRASVPQHDQVCTSLPVTKRGKLFGNDLAV
                     ICEDGNLPKAILDMFSLINEKGPSTDGIFRLSTNMSACHSLKDKLDSGTKVNMNKEDV
                     HVVASVLKEFLRSIQGSVLTSRLYDVWLGVLDQRNEEEKLAAVQSVPLVEHITESRKC
                     FSLLEQLPHPNVILLRQLFRMLHNIDRNSAVNQMTAYSLSVCMAPSILCLPSSCSSGL
                     ANDISNEVSLIKFLIGNSLKIFGEDMALCSQATSLSCPDVEKASCSLNNITYFGETAD
                     KEYQDNRCRSGRSCPTGKDSVTISPAVPLHNEGTIESEKPVKRQMITKPMITCGSGTS
                     HDNVCMTPSPSAPNKGHLFGKSLKSICKDGNLPAPILDMLSLIDEKGPSTERIFRTLA
                     NKSYLTLKQKLDSGEEINLRQESVYVVASVIKEFIRNIQGSLLCSNLYGKWLDVPHLE
                     SHDQKISAIQSLLKQMPEPNVLLVRHLLSVLHKIKSRVSVNHMTAYALSVLIAPNMLW
                     NSTPLKSEFGNDISQKIAIVEILIENFLEIFGEDATVFYGEIPKSCRETENALGFLNT
                     VADSNKMRNARGDNKGICHSEKMHPHEYEGESLSAS"
ORIGIN      
        1 ttcagatttc agcagttggc ctaccaactg ccagatccac ctttggtctt tagagccaca
       61 gaaggacatc cagtgtgagg ttctccattt cagtctctct tgtaaagggc ctgacagtcc
      121 atatcatatg gtcatgagca accttcaagg tacttctgga ccacagggat caggaaactg
      181 ctcagatgtt cccaacttgc cagggcagtg tgtggaacat ctaagcccag atgcacaaga
      241 gcaattcatc ccgaagccca gagaccaatc aggaagccag cagcagagag attcagagaa
      301 gaaaaaagtg aaaaaaaggt ggtctttcat aactcgaata ttccacaggg cctcggtgcc
      361 ccagcacgac caagtttgca catccctgcc agtcactaag cgaggaaaac tctttggaaa
      421 tgatcttgcc gttatttgtg aggatggaaa tcttcctaaa gcaattctgg atatgttctc
      481 acttatcaat gaaaaaggac caagcactga cggtatcttc aggctatcaa ccaatatgtc
      541 agcatgccac tccctaaaag acaagctgga ttctgggaca aaggtgaaca tgaacaagga
      601 agatgtccac gtagtggcat ctgtcttaaa ggagtttctt cgtagtatcc aaggaagtgt
      661 gttgacatct agactgtatg acgtatggct tggtgtcctt gaccaaagga atgaagagga
      721 gaaactagct gcagtgcaga gtgttccctt agttgaacac attacagaaa gccgtaagtg
      781 ttttagtctt ttagagcagc tgccccaccc aaatgtcatt ctcttgagac aacttttcag
      841 aatgttacac aacatagaca gaaattctgc agttaatcag atgaccgctt acagtttatc
      901 tgtttgcatg gccccaagta tcctatgtct gcctagttcc tgcagctctg gattagcaaa
      961 tgacatctca aatgaggttt cccttataaa atttctcatt ggaaacagtc taaaaatatt
     1021 tggagaagac atggctttat gctctcaggc cacctcactg tcttgccctg atgtagagaa
     1081 agcatcatgt tccctaaaca atataactta ctttggtgag acagcggaca aggaatatca
     1141 agataaccgc tgtcgaagtg ggaggtcatg ccctacaggc aaggattcag tgaccataag
     1201 tccagctgtt cctcttcaca atgaggggac tatagaatct gagaaacctg tcaaaagaca
     1261 aatgattaca aaaccaatga ttacctgtgg ctctggtacc agccatgaca atgtgtgtat
     1321 gaccccatcc ccatcagcac caaacaaggg acacctcttt ggaaagtctc tcaagagtat
     1381 ctgtaaggat ggtaatctgc ctgctccaat tttggatatg ctctctctca tcgatgaaaa
     1441 aggaccaagc acagaaagaa tcttcagaac gttagctaat aaatcatacc tcaccttaaa
     1501 acaaaagctt gactctggag aggaaattaa cttgagacag gaatctgttt atgttgtagc
     1561 atctgtcata aaggaattta ttaggaatat ccaaggaagc ttactttgtt ctaatctgta
     1621 tggaaagtgg cttgatgtcc ctcatctaga atcccatgat caaaagattt ctgctataca
     1681 aagtctttta aaacagatgc cagaacccaa cgtcctcctt gtgagacacc tcctcagtgt
     1741 gctacataag attaaaagtc gcgtttctgt taaccacatg acggcttatg ccctatcagt
     1801 tctcatagct ccaaatatgc tttggaattc tacccccttg aaatcagagt ttgggaatga
     1861 catctcacaa aagattgcta ttgtagaaat tcttattgag aactttctgg agatatttgg
     1921 agaagatgcc actgtgtttt atggagagat cccaaagagt tgcagggaaa cagagaacgc
     1981 tttaggtttc ctgaatactg ttgctgactc taataaaatg aggaatgcca gaggtgacaa
     2041 taagggcatc tgtcatagtg aaaagatgca tcctcacgaa tatgaaggag agagtttatc
     2101 tgcttcttag gaagaagacc tcacagaaac gactgcagga ggagggtggc aagcagcatc
     2161 tggatggcca aataacttct ggatgaaatt tttttctcag caactgaata cttgaatccc
     2221 caggactaca ttgaatttct cttcttcctt cactttattg attattctac taaactcctt
     2281 tttttataac ctgttttacc aatgtttgaa ggaatttgtt tggatttctg cttctgccca
     2341 gaaatgagaa tcctgtcccc aaacaacatg ccactatcaa ccaatagagg caccgaagga
     2401 gattcttcta gaatgtgcga cttgagcctt aagtaagcac ttctcaagtc ccattccttc
     2461 tgaatgtgtc gtgtcccctc ccacttacca atacctaaga aaagcttaat aataaacagt
     2521 atttctcttt ctccattt
//
