LOCUS       XM_235171                678 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 4432406C05
            (RGD1306282), mRNA.
ACCESSION   XM_235171
VERSION     XM_235171.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 20, 2012 this sequence version replaced XM_235171.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..678
                     /gene="RGD1306282"
                     /note="similar to RIKEN cDNA 4432406C05; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 38% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:314858"
                     /db_xref="RGD:1306282"
     CDS             1..678
                     /gene="RGD1306282"
                     /codon_start=1
                     /product="transmembrane protein 186-like"
                     /protein_id="XP_235171.6"
                     /db_xref="GeneID:314858"
                     /db_xref="RGD:1306282"
                     /translation="MTAAELHQDLDPDTTTYTTYHRQALSSTPPSAWRRPLQQLWCRT
                     GQGDSVRWVGRSQQAQRLKKIHTIYRFNAIRALGFLSRLKLAQMAVTVMASPPGFYCY
                     SQGLMTLSSLGLMSGIARFALVMLCWMSHFFWRLMGILYVNESGTLLRVAHLTFWGWR
                     QDTYCAVSDMMPLLESEEQVQDEFLGIQQYSGKQTFYLTLRYGRILERDRFSQVFRTL
                     ATLKNSK"
ORIGIN      
        1 atgacggcgg ctgaactgca ccaagattta gaccctgaca ctacaacgta tacaacctac
       61 catcgccagg ccctctcttc aacgccaccc tctgcatgga ggaggcctct acagcaactg
      121 tggtgccgca ctgggcaggg ggattccgta aggtgggtgg ggagaagcca gcaggcacag
      181 agactgaaaa aaatccacac aatctaccgc ttcaatgcca tcagagcact tgggttcctg
      241 tctcggctga agttggcaca gatggctgtg actgtgatgg cctcgccccc aggcttctac
      301 tgctactcac aaggcctcat gaccctcagc tcactgggcc ttatgagtgg gattgcccgc
      361 tttgccctgg tcatgctgtg ctggatgagc cacttcttct ggagactgat gggtatcctc
      421 tatgtgaatg agtcaggtac cctgcttcga gtggcccacc tgaccttctg gggctggcga
      481 caggacacat actgtgccgt gtcagacatg atgcccctgt tagaatccga ggaacaggtc
      541 caggatgagt tcttgggcat ccagcagtac agtggcaagc agaccttcta cctcacccta
      601 cgctatggcc gaatcctgga aagggatcgt ttctcacaag tgttcagaac cctggccaca
      661 ctaaagaaca gcaagtag
//
