LOCUS       NM_001024986            1850 bp    mRNA    linear   ROD 07-OCT-2023
DEFINITION  Rattus norvegicus oogenesin 3 like 1 (Oog3l1), mRNA.
ACCESSION   NM_001024986 XM_233633
VERSION     NM_001024986.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1850)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            BC090317.1.
            
            On Jun 25, 2005 this sequence version replaced XM_233633.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC090317.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1850
                     /gene="Oog3l1"
                     /gene_synonym="RGD1306186"
                     /note="oogenesin 3 like 1"
                     /db_xref="GeneID:298621"
                     /db_xref="RGD:1306186"
     exon            1..57
                     /gene="Oog3l1"
                     /gene_synonym="RGD1306186"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..1527
                     /gene="Oog3l1"
                     /gene_synonym="RGD1306186"
                     /codon_start=1
                     /product="uncharacterized protein LOC298621"
                     /protein_id="NP_001020157.1"
                     /db_xref="GeneID:298621"
                     /db_xref="RGD:1306186"
                     /translation="MVLCQQCPTQPPSLREVTQNVYSPTTLLKLARQRLLREEALAIS
                     ALKDLPNMMFPEMFEEAFIDGRTKILTAMIPVWPFPYLSVGMNINNLNLDTLKAVLEG
                     LDILISQKVRSSRCKLRGIKWRDTQHDVCGIWSGFHEDKDLPESTTQKQPVENSPECE
                     VKKELKVMTQLQLAEGRVDESTIYLLQWAQQRKDSFHLCCRKLEIQGLTKDTLVEIFN
                     TIRADCIQELKLGFFFINELDLLNPYLRQMNNLLRLTLDHLRGSIGFGEENEEEKAIT
                     LISQLPAFHCLQEFNINDVSFIDGNLKEFLRCLKKPLETLCITNCQLSQSDLDYLPYC
                     QNIFELKRLYLSLSLHNLLLAPLGFLLERVRHTLECLNLKSCEIKESQLNALLPALSQ
                     CSQLTDVNFYDNNFSLLSLKQLLHHTGKLSQLTNEVYPAPLECYDNRGVILTNRLKNF
                     GPELLDIVRAKRQPKKVAFATMPCFRCDGHYVYDLETQCCHFKWDPLQS"
     exon            58..368
                     /gene="Oog3l1"
                     /gene_synonym="RGD1306186"
                     /inference="alignment:Splign:2.1.0"
     exon            369..947
                     /gene="Oog3l1"
                     /gene_synonym="RGD1306186"
                     /inference="alignment:Splign:2.1.0"
     exon            948..1825
                     /gene="Oog3l1"
                     /gene_synonym="RGD1306186"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagtcgcag actttctgga cctgattatg gtgctctgtc aacaatgtcc aactcaaccc
       61 ccctctttaa gggaagtcac acagaatgtc tactccccaa ccaccctcct gaagctggca
      121 agacagaggc tactgaggga ggaggccttg gccatttctg ctctcaaaga cctgcccaat
      181 atgatgttcc cagagatgtt tgaggaggcc ttcattgatg gacgtacaaa gatcttgaca
      241 gccatgatac ctgtgtggcc ctttccatac ctttctgtag gaatgaatat aaataacctt
      301 aacctggaca ctttgaaggc tgtgcttgag gggctagata tactgatttc acaaaaggtt
      361 cgctccagta ggtgcaaact cagagggatc aaatggaggg atacacaaca tgatgtgtgt
      421 ggaatatggt ctggattcca tgaagataaa gacttaccag agtccacaac acagaagcag
      481 ccagtggaga acagtcctga gtgtgaggtg aaaaaagaat taaaggttat gactcaactc
      541 caactcgcgg agggcagagt tgatgaatct actatatact tgttgcagtg ggcccaacag
      601 agaaaagatt cctttcatct atgctgtaga aagctggaga ttcagggctt aactaaggac
      661 acactcgtag aaatcttcaa tactattcgt gcagactgta tacaagaact gaaactaggc
      721 tttttcttca taaatgagtt ggatctcctt aatccctacc tgagacaaat gaacaatctt
      781 ctcagactta ctctagatca cctcagaggt tccattggtt ttggtgaaga gaatgaggag
      841 gagaaagcaa tcacactgat ttctcaactt cccgcatttc actgtctcca agaattcaat
      901 ataaatgatg tctcttttat agatggcaac ctgaaagaat tcctcaggtg cctgaagaag
      961 cccttggaga cactctgtat cactaactgt caactctcac agtcagactt ggattacctg
     1021 ccctattgcc agaatatttt tgagctcaaa cgtctgtacc ttagtctgtc tttacacaat
     1081 ttactccttg cgcctcttgg gtttctcctt gagagagtta gacataccct ggaatgcctg
     1141 aacctgaagt cctgtgaaat taaggagtct cagctcaatg ccctgctgcc tgccctaagc
     1201 caatgttccc aactcacaga tgtcaatttc tatgataata atttctctct gctttccctg
     1261 aaacaacttc tacaccacac aggcaagttg agtcagctga ccaatgaggt ataccctgct
     1321 cccctggagt gctatgataa cagaggagta atactaacaa acagattaaa aaattttggt
     1381 cctgagctcc tcgatatagt cagggccaaa agacagccta agaaggtcgc ctttgctaca
     1441 atgccatgct ttaggtgtga tgggcactat gtttatgatc tggagaccca atgttgccat
     1501 tttaaatggg atccacttca aagttgattg tggaatagaa aaatggaagc ttattattgg
     1561 ggattgatga aaccttaagt gaatgtccct tgctgaaagg agcgtggata tgtcaatcac
     1621 ctaaaggtct gagacacatt agataggcaa gatcttccta tgaccaggtg aatggatgtt
     1681 gcatcccaga atatatcaag cactcttttt gctcctagaa ttatcatact ttgagtgtgt
     1741 tacaatacag gcacctatcc ataaggagat tgtcccctct gttgactgta tacaataaat
     1801 gtgttgactt tctgagttgc taataaaaaa aaaaaaaaaa aaaaaaaaaa
//
