LOCUS       NM_001108674            1092 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            210 (C5h1orf210), transcript variant 2, mRNA.
ACCESSION   NM_001108674 XM_001072609 XM_342895
VERSION     NM_001108674.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Apr 4, 2023 this sequence version replaced NM_001108674.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643286.17757.1,
                                           SRR26643291.15733.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-210               JAXUCZ010000005.1  137334142-137334351
            211-317             JAXUCZ010000005.1  137336248-137336354
            318-1092            JAXUCZ010000005.1  137336526-137337300
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1092
                     /gene="C5h1orf210"
                     /gene_synonym="RGD1305347"
                     /note="similar to human chromosome 1 open reading frame
                     210"
                     /db_xref="GeneID:362576"
                     /db_xref="RGD:1305347"
     exon            1..210
                     /gene="C5h1orf210"
                     /gene_synonym="RGD1305347"
                     /inference="alignment:Splign:2.1.0"
     exon            211..317
                     /gene="C5h1orf210"
                     /gene_synonym="RGD1305347"
                     /inference="alignment:Splign:2.1.0"
     CDS             290..634
                     /gene="C5h1orf210"
                     /gene_synonym="RGD1305347"
                     /codon_start=1
                     /product="type III endosome membrane protein TEMP"
                     /protein_id="NP_001102144.1"
                     /db_xref="GeneID:362576"
                     /db_xref="RGD:1305347"
                     /translation="MSSTTAANLTLSLGVTNASTLDPGQGTGGRAWPVLVGVVLGAVV
                     LSILIALAAKCHLCRKYRASYQHRPLSGTGVGNRPQVGEDEDDDGFIEDNYIQPGAGE
                     METTGSRDHFSL"
     exon            318..1092
                     /gene="C5h1orf210"
                     /gene_synonym="RGD1305347"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagatctgtc ccttcaggga caggctggac ccctgctgca ttccagttgc actaatccac
       61 ggcagtgggg gagggagcaa gcttgctccc ccctcaacac ttggtgaggt gtgagctgag
      121 tcctctctgc tgagggaact gcaaatcccg gcggccgtcc gccctccctt cacctgcact
      181 tccgccccgc ccaccctgcc accgttccag ggcttgtgcc ccagggctgc ctggagcctt
      241 gggtgtccct ggagccagga ctttttctgg cagaagccaa ggctcaccga tgtcgtccac
      301 gactgcagca aacttaacct tgtccttagg ggtcaccaat gcatcaacct tggatcctgg
      361 acagggcacc gggggccggg catggcctgt gctggtaggg gttgtgctgg gggcggtggt
      421 cctctccata ctcatagcac tcgctgccaa gtgccacctc tgccgcaaat accgtgccag
      481 ctaccagcat cgcccgctgt ccggaacagg agttgggaac cgcccacagg tgggtgagga
      541 tgaggatgac gacggcttca tcgaggacaa ttacattcag cctggggctg gtgagatgga
      601 gactacagga agccgggacc acttctctct ataagtccca tctttggaca cttccctcca
      661 tgcctggcag tttaaagaca gtgacacctc aagtctcagg gtcagaattc gctagtacct
      721 aacgcttgac caggaacctg ttttctgaca ttggtcgcca aagtgacaat tctgtttctc
      781 attaactctc cgaggctccc cgctgtccca ggatacagcc tgacagtgca tgaacgtggg
      841 aaaaggcccc tgtgagcaga cctcttgatt gcctttcttt gacccccact tcctacttta
      901 cccacttctt gggctgcatt gacacccctc acgaaggcag ccccgaccta caagtcctgg
      961 gatttcacac aggtcccagc agaagaccgt gccaaacttc ttaccgaata tttttttctt
     1021 ttcaataaag tatatgactt ggttataata tatcatgttt ttcacagtaa ttaataaatc
     1081 tattttaatg tt
//
