LOCUS       NM_001394984            8062 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus interferon-gamma-inducible GTPase 4 like
            (Ifgga4l), mRNA.
ACCESSION   NM_001394984 XM_225905
VERSION     NM_001394984.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 8062)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On May 13, 2021 this sequence version replaced XM_225905.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643290.51644.1,
                                           SRR26643297.50283.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4570              JAXUCZ010000018.1  56108872-56113441
            4571-4632           JAXUCZ010000018.1  56114348-56114409
            4633-8062           JAXUCZ010000018.1  56121873-56125302
FEATURES             Location/Qualifiers
     source          1..8062
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.1"
     gene            1..8062
                     /gene="Ifgga4l"
                     /gene_synonym="Ifgga4; RGD1305184"
                     /note="interferon-gamma-inducible GTPase 4 like"
                     /db_xref="GeneID:307412"
                     /db_xref="RGD:1305184"
     exon            1..4570
                     /gene="Ifgga4l"
                     /gene_synonym="Ifgga4; RGD1305184"
                     /inference="alignment:Splign:2.1.0"
     exon            4571..4632
                     /gene="Ifgga4l"
                     /gene_synonym="Ifgga4; RGD1305184"
                     /inference="alignment:Splign:2.1.0"
     exon            4633..8062
                     /gene="Ifgga4l"
                     /gene_synonym="Ifgga4; RGD1305184"
                     /inference="alignment:Splign:2.1.0"
     CDS             4653..5900
                     /gene="Ifgga4l"
                     /gene_synonym="Ifgga4; RGD1305184"
                     /note="interferon-inducible GTPase 1"
                     /codon_start=1
                     /product="interferon-gamma-inducible GTPase Ifgga4
                     protein"
                     /protein_id="NP_001381913.1"
                     /db_xref="GeneID:307412"
                     /db_xref="RGD:1305184"
                     /translation="MGQLFSDTSKSEDNGGDLVSSSNAYFKKINTKTKIISPETIRLI
                     ELHLSKGNILGASDLISDALKNIESIPINIAVTGESGAGKSSFINALRGIRPEEEGAA
                     EVGVVETTMERTPYQHPKIKTLTLWDLPGIGTQKFPPKTYLEKVKFEEYDFFIIASAT
                     RFTKLELDLAKAIRIMKKNYYFVRTKVDFDLENEKRSKPRTFDREKTLKKIRGCTMKT
                     FRENNMDVPQIFLISSYNLSDYDFPVLMDTLIKDIPAQKRYNFMLSLPKITEAAIDRK
                     HKAMQEFVWLEAFKTGALATIPALGILRDNDVEKLRQKLNNYRQLFGVDDESLEFMAK
                     DFQVPVAQLKEILKSPHLLKTDREETLQDKLLKYLEIFASANGGLLATGLYFRKTYYL
                     QLHFLDTVAEDAKVLLQWKYSKH"
ORIGIN      
        1 gttggaattt gcaccatgac ggtctgttgg ctagcaattt tattgtttgt tttcaaccta
       61 ggcaaaaata ttagccagaa ttgatcaaga aatgagagaa atgagaacag tggttctgca
      121 aaatagaact actataaact acccgttact taaacataat cctcattatc agcaatttac
      181 tggaatacac tgtttaatat ctctagtttt tgacatatta ttgatgaaca agttgataat
      241 tgaagtgaag aaatagatga aacctcctca aacaaatttt gactggcgaa tatgactaaa
      301 atggttctcc cacttcattg gctctctaat attatttcca ctagttatca taatcaggcc
      361 ctacatgctc tctaatgtat tacaaacttg atcatccttt agataaacag tgctagaatt
      421 attgttactc tttgctagaa tcataactag aatagttgct ggcattacta aacacagtcc
      481 cttatcaaga atttgacagg aacccatttc taaagggaga acgaagaatg gcttgactcc
      541 atttggaagg caggagccat tatgctgtct agttaataat aagtttcttt cactgtttcc
      601 ttgatgtatc ccaacccatg gccttgactt gttttgagga acacccaagt taggagggaa
      661 cacgttcccg agttacaagc cagccatgtg gtaatggctg ctagttttgg tttggttttt
      721 taagactttt ctgtacttcc ttactgttac attgtctttg gtaaaactgc tttgcaaata
      781 ttccagaagg aatgcatcca atgtcgcaaa actatctttt gaaaaagaca tgatcacaaa
      841 gtaaaggggt agtgttcagg aatttccttt gcaaatttac tcctcaaaag ggacctgtct
      901 tagttagggt attcatggtt gtgaagagaa accacgacaa aggcaactct cataaagagc
      961 agatcgatcc atgcttatca ccctgtacaa agcttaagtc caagtggatc aaggacctcc
     1021 acatcaaacc agacacactc aaactaatag aaaccgggaa agggaataac actcgaaatg
     1081 tatataagaa atactcaagt taataaaaat aaataaataa ataaaaatta aaaaagagca
     1141 acatttaaat ggggatgctt tacaacaggg agaagaaaag agttggaggg ataaataaca
     1201 ctagagtatt tgtaaaagtc atatgaaaat ctatcactgt agaggcttcc aaaaataaat
     1261 ctatacacat ctatgcaaag agttaagata gagttgccct caacttaggc agcagtgccc
     1321 cattagacac cacagggcaa caagaagccc acttccagga gctagtttga tttttacagt
     1381 tgctagacag agtggtctct aacccttata ggccattgtg cctgctcttc tttagtttcc
     1441 caaatttgga acttccaata agtgttgata agacagacac atacttgagt tataaaacat
     1501 ggcaaaaatc aagctaatac tgattcagaa gcttcatctc tactggacag cgttcatagt
     1561 gctagaagga actgtcttta ataccagagg agaaaaggaa tcattaacca gccccagatg
     1621 tgagatacaa taatgactga atgggaaaga catacccact tatgtcttta gcaagcacta
     1681 aataaagcta aagacacata aagtgtagta gtggtaagaa tgtcatctaa gtaaccaact
     1741 gcttcctggt tgggtttaat agcctctcca taagatgaaa cccatacctg gcaaagaact
     1801 aaacgctaga cagatcattt accttaggtg agaatgacta ctattttacg gttaaatggg
     1861 cacagtgtta agccacctta aatgatttat cacttttccc atagattaag gtatccctca
     1921 acttttacca tggatgctag tgtttttcag aagatgataa tcaacacaga tacccacaat
     1981 ggccatgagg cagagaataa gacagtgagg aatgtctaac ccttgatgta acatgaatac
     2041 ttctacctca aaggcacagg ggtgggtgtg gaagaggggg taaaagacag taagagccag
     2101 agttggaaga tcactacaag gaaagaaaca gtgtcttctg gacacagcag ggcagctcta
     2161 cagatgaaga atgattgtga aagcacatgt aagacctgtc tgacccaagc cagaccaaac
     2221 cccagccaga cagggaaaat caggaattgc aaggtatgtg aatcttgtga ggaaataaga
     2281 ttgaaggcag aggggtgaga tggttgtcca acgttgattg acatctgtac aggagcccag
     2341 acaatggcct gtgtaaattc agttcgagct gcacttgtgg agtcaggcat caggaaaatt
     2401 acctttcaag gctgtgcttc aacctactta gtaagctggt tgtccatgtt ccgcctcagt
     2461 ttcctagtcc cacattctac atactttatc attttaggac cgtgtaggtt cttctgccaa
     2521 gaaatgaaag gttaataggt cgaaagacag ctaagtagct tgatatttca ctttcagctt
     2581 cttggaaata aaggtgcttc tgaaaaacaa tcttatccac ttatatcttg gccagcatat
     2641 acctagagac aaggagaagc cagaagtatt ctgcctaacc accttgaacc tgacattttc
     2701 ctcataggaa gcaggacgag ggttcatgta aaaagcttgg agcagaattg aggagtacct
     2761 gcagctgaac tatagcgtgt gaatccaggg gacatgggca tttccactaa gtgagcagga
     2821 gtgttcagat ctaacctctt accctcacca tctcttttct ctaaagagct aatatgtagc
     2881 aagacattta gcaagatgcc tagacactgg gggtcctcag ctaggaagct agggggattt
     2941 gatgggaggt gggcagatct ggcttgtgga tggtctttgc tcacatcatt caagatgaga
     3001 ggctttaaag aaatgatctg gatgttggat ttggtaaaat atatccaatt aatttgcttg
     3061 cctcttattc ccgtccttaa aatggttgca atggatgtca ggtaacagac tatctctgca
     3121 gtgtgtctga ggtttgttgt ctctcaggct caaattgctt cccaattcag ggtcaaataa
     3181 ttaatcccta acatccctgg ggacactgaa ctgtggagaa gaggtctctc tacaggctgc
     3241 ttctgctgga gctggctgta gaaatctgtg tcccaagagt tgtgttcaaa cccttcaaaa
     3301 ataattgtat ttattgcaaa gcaggagagc taaggatctt ctcggcatcg gtgaggaaca
     3361 tgcgctgtgt caggacatga tggcagctgg cctttaggca ggcctccttt tgtaatggcg
     3421 gcagctgtgc catagccttc gtctgctatg ttcctcttcc ttgggaagaa cttgcagatg
     3481 cctagtactg tggagtctgc gtcacaaaac caggagtagg aatagaaaga aagggaagag
     3541 ggaactgaag agttgagaac aggttgtgtt cttttcctat actggccata caccctaggt
     3601 gagaatctaa tactatttat tctgctaaat ggattcaata gtaaaccagc tcctactgat
     3661 ttgccattgt acccatagat taaggcatcg ataaaccctt atggaagctc atatatgtgg
     3721 taggtgataa tcaatagaga tatccacaac tggccaaggt acaaaacata agacatctat
     3781 aaatgtccaa cactaagtga aatatatata gaactccctc caaaggcgcg ggaatgactg
     3841 cggaagaggg cgtggaagga ctgtaagagc cagagttggt ggaaatacaa gaaaacagtg
     3901 tatttaccac actacaggga agccacatgt aaaacctcac agtgattgtg acagcatgtg
     3961 taagactcct caagccctag acagaccaaa tcccaagaag acaggagagt tgacaagaat
     4021 taaggaacat ggctctacag tggtagggaa ataaggttgt agtcaaagag gagacagatt
     4081 gtgtcttgag tgatactaaa attagcatct gcacagactc ccagacaatg tgttgtgtga
     4141 ctgtagttta ggctgcattt gtgaagtcag gtttcagaaa aactcacggg ttcaggtcaa
     4201 gcctagttag taaactgttt cttcatgccc cataaatttc caagttcccc gctgttatgt
     4261 tagaactgtc caggtttctc tgccaaaaag ttaagtgttt ctggcatgaa aaataactgt
     4321 tctgtttcac tttcatcttc ttgaaaatac agtagattct gaaaagcaat tagacctatg
     4381 ctcccccatg attggccaac acacaatgag ataggagagg cataagccag aaggatgtgt
     4441 aagtcctata taactgagtt gaacctgctg ccttccacag aggttttcat gtgtagagga
     4501 gggagcacgc tgaaggggat ttcctgtagc taaactacag caaacaaatc cactggatca
     4561 ggattttctg ttcatttgaa caaacttctg tatctcggga ttcctgcaca gctgtcccaa
     4621 tttctcctga agtgaccttt taaatcatcg acatgggtca gctcttctct gacacatcta
     4681 agagtgaaga caatggcgga gatttggtgt ctagctccaa tgcctatttt aaaaagatta
     4741 atacaaaaac caaaattatt tctccggaaa ctatccgttt aatagagtta cacctgagca
     4801 aaggaaacat tcttggggca agtgatttaa tcagtgatgc attaaaaaat attgagagta
     4861 tcccaataaa tattgctgtg acaggggagt caggagcagg gaaatccagc ttcatcaatg
     4921 cactgagagg gattagacct gaagaggaag gtgcagctga agttggggta gtagagacaa
     4981 ctatggagag aactccttac caacatccca aaattaaaac tttgacctta tgggacctgc
     5041 ctggtattgg aactcagaaa ttcccaccaa agacttattt ggagaaagtg aaattcgaag
     5101 aatatgattt cttcattatt gcttctgcca cacgttttac aaaacttgaa ttagacctcg
     5161 ccaaagcaat cagaattatg aaaaagaatt actactttgt gagaaccaag gtggattttg
     5221 atttagaaaa tgaaaagaga tccaaaccac gtacttttga cagagaaaag accctgaaga
     5281 agatccgagg ctgtactatg aagaccttta gagaaaataa tatggatgta ccacaaattt
     5341 tcttgatctc tagctataat ttatctgact atgattttcc agtcctgatg gacaccctga
     5401 ttaaggatat ccctgctcaa aagcgctaca attttatgct ttccctgcct aaaattacag
     5461 aagcagccat tgacagaaag cacaaagcta tgcaggagtt tgtctggcta gaagccttca
     5521 aaactggagc tttggcaact attcctgcac tgggcatcct cagggataat gatgtggaga
     5581 agctaaggca gaagttaaac aactaccgac aactctttgg agtagatgat gaatctctgg
     5641 agtttatggc taaggatttc caagtgcctg ttgcacaact gaaagaaata cttaagtctc
     5701 ctcatttgtt gaagactgac agagaggaaa cattacaaga caagctattg aaatatttag
     5761 agatatttgc atcagctaat ggtgggctcc ttgctacagg tctttacttc aggaaaactt
     5821 attatttaca acttcatttc cttgacacag tggctgaaga tgccaaagtt ctccttcaat
     5881 ggaaatattc aaaacactag ttcaaattca acttatccac aacttcttac cctgacaaca
     5941 tcaagtgatc aatatcagga agtcactagg gaaattcccc ctctgatagc ttttctttac
     6001 agccaatcca ctaccaccat ggaaaagctg aggataaaga ccatgtgtct taatatgcca
     6061 gaacctgaca atccccaatc cttcttcagt ttttaatttc tctcatatca ttttctcttt
     6121 acactacaca tacatacttg aatacataca cacatgcaca cacatgcaca tgcacacaca
     6181 aaaacatgcc agtgaacatg caaatgcata cacacaaaag atacaatagg tgttttgtag
     6241 ccatttgccc ctaatcaaag catcctaaca aagattcaag aaactcaggt ctctatgctg
     6301 agtacataaa acacttggca tgtgtattgg tttgaacaca tatggctcca ttgactcaat
     6361 tgttttaagg cttcacccat aggtagaggc aatattagaa agtatggcct tgttagaata
     6421 attgttgcca tgttgggggc agtaggtgta ttcgaagtct tatagatgtt cacgtatccc
     6481 agttttgtag ttattttctg ctgccttgga atcaagatgt agacctcttt gctcctgcag
     6541 acccatatct gcctgcacat ggccatgctt cccacatgat gaaaacggaa taaacctctg
     6601 aactgtgagc cagccccaat taaatatttt cctttataag agttgccttg gtcatggtgt
     6661 ctctacacag caatagaaac ccaaagacag aaatagttcc cagggacttg ggtgttgctg
     6721 tgatgggcct gataatgttt tcatttggag gaatttggac tttgggactt tgtgttagga
     6781 aagcactaga ggactctaag agctaattaa tgggccatat tagtaagagc atgaaagaca
     6841 gtatttattg ccggggtgat gtaacatttg agtcctagat taggagcttt cagaggacaa
     6901 gcatattagc atgttgccta gacatcatcc ttgtattatt ttggtgaaga atgtggctga
     6961 tttctgcgct tatccaaaaa ctcagcctaa aactaaagtg aaaagatttc aattaattgc
     7021 attggcagag gaaatctcaa agcaacctaa catagacact gccctgttgt tcattctttt
     7081 tgaagatgat tttgttgaaa cagtacaaac ttagaaagga aaaaaatgca tggtttaagg
     7141 attaaagtgg taccagaaat tggaaaggag ctaaattctg tgttcagaaa gataaacaga
     7201 ttgaagatat ttaatggaat taagggagag gtaacctcag ggcaagatcc cacccaggta
     7261 agcttctatt ttataaaaag gaattaaaga aaagcttagg tccagctttt aatcttagaa
     7321 ctaagctgag aggggcatgt aggtctcttt ttggtttaag gtcagtcagt ctacagagca
     7381 acttccagga gagccaagtg gcagacgcca tgaaggaaaa ctgctgtgga gaagcgggcg
     7441 tcctggagac tgcccactgt tttgctcaga tactgtggta cacactggag tagcacagtg
     7501 ccagggcttg atttcaggat tgctacttgt cttctcatgt ctgtcactgc tatattcctc
     7561 acatatctct agcttgatgt gattgggaat gaggaggacc tcactgccta gagcctggtg
     7621 tgattcctcc ctgggtgata gcccactcta ctgagcaatt ttcctgcaga tcagcatgaa
     7681 gatgaacatt tatgagataa cattatttag attaactaat ggttttacag agttcttgga
     7741 ttgatttaaa tagttaaaat aactagaaag tgtaaggagg tggtttaagt tgttttgcca
     7801 gaaatatatg aaaaagtaaa aaaccagact acaatatgcc ctttccctgt aggtatgtgt
     7861 ttcaaagact taaacataat caacaatacc attgcaatta cctgctatgc catcatttta
     7921 tctgtttgtg aagaatatgt tgtggtggta attgatttta attaatatgt aattgtgcct
     7981 atgtagcaat ctttcttaca taaagaactt tgtcttaggt ggtataaaat tgctaagaaa
     8041 aaaataaagt tgttaaaatc aa
//
