LOCUS       XM_039087324            4325 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 4933427D14Rik protein
            (RGD1304728), transcript variant X3, mRNA.
ACCESSION   XM_039087324
VERSION     XM_039087324.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4325
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4325
                     /gene="RGD1304728"
                     /note="similar to 4933427D14Rik protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     1 sample with support for all annotated introns"
                     /db_xref="GeneID:360560"
                     /db_xref="RGD:1304728"
     CDS             537..3623
                     /gene="RGD1304728"
                     /codon_start=1
                     /product="protein moonraker isoform X1"
                     /protein_id="XP_038943252.1"
                     /db_xref="GeneID:360560"
                     /db_xref="RGD:1304728"
                     /translation="MGPSQPASTCVHLASSLQLDGMTDPRNLQPQNQLQFNRNVPTDP
                     SNLAVRYSCPHGIKIEKLKHSYNELHHGKDLDFGAGNELSSSVSFSVISEERLSYAVH
                     LAKRDVKRRQFEEHVKDHLRSQPQSSHKCMHTKVERKDSKSQDVCHCSHQPSKVSISS
                     SGAKVYVYTSHRGRADLPMPNSPPTHDPGPQPQPRIEEHRNLWEQKGLLEVQRLQKEL
                     SSCIHKIEGLTKKDRLEEALDPDEEHRIRVRRQEQAVRSARMLYVLQQQVKEIQEELD
                     KLSPRKIKHTKKSWAMSRLAAAHRAAIRALQVFITQFTDRGEHPVPARCRELGSLIRQ
                     LSLCSAKLDVDPSVPDVVIDILQQIEALESLLEKKLSPKKAKKCFTEIRSRFPIGSQK
                     ILERWPTVLPKSERRPLVTKETFPQETSRPSVAKRLLADLLAIAHSEECGVSLLSVGM
                     LAAACASSRGGDGHPDECRPRLLFCTSVQDVGQPDELQRLERELDALDTGIPPQEASH
                     ILDHGTDFKDETLTPVKPQAVRKKTVTGHMPLRKKDTSESARSQQGLHISERNRPNQP
                     YSKSRLQQTTVSSRLKMNRQPVKDHRAPWIPPNPTSPPASPKCAAWLRGKYNPRDAAK
                     VQSLQQETTHRESQLGGAAEQEAARLSWPDAESSKRLKELEELEAKELERKQKQRLDW
                     LEAETSRRTKELDELKAEEMARLQKLSVSATQLADKVEEAVLERLKPLLIKAQRVNSS
                     VEVNGHLKDLPSRSRAAAPTAAQPAVQASDVHFESRNICQLDDCLEDSAHELRAVTHD
                     KILGSETSTRLGDSKDSPDLETMMLRMEEMEKYQETVRQRYNKIVYADPHLWTHEERN
                     DQNTPAVSERPLASHPIKITKTATRKCPEVNILLERPCSANSLDESMGTEEESEKMEA
                     PLPFFREDLHQKEGQTPLSVPPGMRHSIGDYCSRYEQFLRIISHEAIGSFNPWLIAES
                     YRQKTVIYKEEAWQASPHLNGQNQQSTLKGQALRGHRSPLLHLFQNYAADMIIREY"
ORIGIN      
        1 tcttcagtgc ggcggatgct ctgtgcaaac atagggaggg tgcagaatgg tcggcggcct
       61 ttacagagga ctgtggagcc tgcagtatcc ccgggggtga aaaaggccgt tgggacatct
      121 gggactgcag gctcgattga ggcagcagtg gaccctagga cagtgtgggt gaatgggact
      181 gtgggcgagc ccgaggtggt tgggcctgct gggtctgtgt gggtgactgt atctgggaag
      241 gaggagctag acaataggag ctcaccgagc tgtgagagaa aaggtcgtcc aggaacactt
      301 ggccatgaga gcatcctgga actgtggttg aaggtgcagg ctatgagggt agcttcagga
      361 tgctgggaag gaagcagagt ggaacttcat cctgttcctg cgggagaggg gccagtcgag
      421 aagggtattc ctgggcgagc ttcctgggta gagaccagcc gagatggtgt tacaggacca
      481 tggggagatt tgcctgatga ttaggcagtc acgcatgtgc ttcatcattg gacgtgatgg
      541 gaccaagcca gccagcttcc acatgtgtcc atctagcatc cagtctccaa ctggatggaa
      601 tgaccgaccc caggaatctt cagcctcaga accagctgca gtttaatagg aatgttccta
      661 cagatcccag caacctggca gtccggtact cttgcccaca tggaattaaa attgaaaaac
      721 tgaaacactc atacaatgaa ttacatcatg gtaaagactt ggattttgga gctggaaatg
      781 aattaagcag ttctgtctcg ttttctgtca tatcagaaga gaggcttagc tatgctgtcc
      841 acctagccaa aagagatgta aaacgaagac aatttgaaga acatgtgaaa gatcatctca
      901 gaagtcagcc ccaaagctct cacaaatgta tgcacaccaa ggtggaaagg aaggactcaa
      961 agagtcagga tgtctgtcat tgcagccacc agccgtccaa agtgagcatt tccagctcag
     1021 gtgccaaggt gtatgtgtac acatctcatc ggggacgagc tgatcttcct atgccaaatt
     1081 caccacctac ccacgatcca ggacctcagc cacaacccag gatagaggag cacagaaacc
     1141 tgtgggaaca gaaaggcttg ctagaagttc agcgactcca aaaggaattg agcagttgta
     1201 ttcataagat agaagggcta actaaaaaag atagactaga agaggctttg gatcccgatg
     1261 aagagcatcg aatccgcgtc aggagacagg agcaagccgt gcgcagtgcc cgcatgctct
     1321 atgttcttca gcagcaggta aaagaaattc aggaagaatt ggataaatta agtccacgaa
     1381 aaattaaaca tactaagaag tcatgggcaa tgtctaggct ggcagccgct catcgagcag
     1441 ccatccgggc cttgcaagtg tttatcactc agtttactga ccgaggggag cacccagttc
     1501 ctgctcggtg cagggaactg ggcagcctta ttcgtcagct gtcactgtgc tctgccaagc
     1561 tggatgtcga tccttctgtg ccagacgtgg tcatagacat cttgcagcaa atcgaggctt
     1621 tggagtctct cctggaaaag aagttgtcac ctaaaaaggc aaagaaatgt ttcacagaaa
     1681 ttcggagcag atttcccatt ggtagccaaa agatcttaga gagatggcca actgtactgc
     1741 ccaagagtga aaggagaccc ttggtcacaa aggagacatt tccacaggaa accagtcgac
     1801 cttctgtggc aaagagactt ctggcagatt tacttgccat tgctcactct gaggaatgtg
     1861 gagtgagcct gttgagtgtg ggcatgctgg cagccgcctg tgccagctca cggggaggag
     1921 atggccatcc tgatgagtgc agacccaggc ttcttttctg tacctcagtc caggatgttg
     1981 gtcagcctga tgagcttcag aggctggagc gtgaactgga tgcgttagac acaggtattc
     2041 ctccacaaga agcttcccat atattggacc atggtacaga cttcaaagat gaaacattaa
     2101 ccccagtaaa accacaagcc gtaagaaaga agaccgtgac agggcatatg ccacttagga
     2161 agaaagatac ttcagagtca gctagatcac agcagggact ccacatatct gaaagaaatc
     2221 gaccaaacca accttacagc aaaagcagat tgcagcagac aacagtgtca tctagactaa
     2281 aaatgaaccg acaacctgtg aaagaccata gggctccttg gatacctcca aaccccacat
     2341 ctccaccagc ctctcctaaa tgtgctgcct ggctgagggg gaagtacaac cccagagatg
     2401 ctgcaaaggt gcagtcccta cagcaagaga ctacccacag ggaaagtcaa ctgggaggtg
     2461 ctgccgagca ggaagcagcc aggctttctt ggccagatgc tgagtcttcc aaaagactga
     2521 aggaactaga agaattggaa gccaaagaat tggaaagaaa gcaaaagcag aggctcgatt
     2581 ggcttgaggc tgagacttct agaagaacca aagagttgga tgaactaaaa gctgaagaga
     2641 tggccagact tcaaaaacta agtgtctctg ccacccagtt agctgacaag gtggaggagg
     2701 cagttctgga gcggttgaag cccctcttga tcaaggccca gagagttaat tcttcggtgg
     2761 aagtgaatgg tcatttgaag gatctcccat cacggagcag agcagcggca cccacagccg
     2821 cccagcctgc agtgcaggct tcagatgtcc attttgaatc caggaacatt tgtcagctgg
     2881 atgactgttt ggaagatagt gctcatgagc tcagggctgt gactcatgac aagatcttgg
     2941 ggtcagaaac ttcaaccaga ttgggggaca gcaaggacag cccagatcta gagaccatga
     3001 tgctccggat ggaagaaatg gaaaaatacc aggagacagt tcgccaaaga tataataaaa
     3061 ttgtatacgc tgaccctcac ttatggacgc acgaagaaag aaatgaccag aacaccccag
     3121 cagtaagtga aagacctttg gcttcccatc caatcaagat caccaagaca gcaactcgaa
     3181 agtgccctga ggtgaacatc ttgttagaaa ggccctgcag tgccaactca ctggatgaaa
     3241 gtatggggac agaggaggaa tcagagaaaa tggaggcccc ccttcccttc ttcagagaag
     3301 atctgcatca gaaagaaggc caaactcccc tctcagttcc accagggatg cggcacagca
     3361 tcggtgatta ctgtagccga tatgagcagt tcctacggat catttctcat gaggctatag
     3421 gctccttcaa cccatggcta atagctgaaa gttacagaca gaaaacagtg atttataagg
     3481 aagaagcctg gcaggcatcg ccacatctga atggccaaaa tcagcagtca acattaaagg
     3541 gacaagcact gaggggacac agatctcccc tcctgcatct gttccagaac tatgcagctg
     3601 acatgattat aagagaatac taaacaaccc aggacctgag gacaatggga ggaaaatgct
     3661 tcactctcca aaaaatgtta cagtcatgaa agagaaagtg aggaacatat tttaaaggaa
     3721 agaggtctaa agagacatga cagctaaata gcctggattg gatcctggat tctaaaacgt
     3781 tttaagggcc ttatttggat ggctggcaag gtttgaaaaa agtctgtacg taagcttaga
     3841 taatggttta tggtactgtt acgacagttg tctacatggt gtcttttcta ggacacactg
     3901 aagttcttga gggtgtccag gtcttcaaca tactctctaa cagttcaaat aaaagaggct
     3961 gtgtgctgtg tagacacaca tgtttatgta gaggcatctg ggctatggag gtccttgctc
     4021 tttcccgtag agaaagcatg tctctgagct ggggctgggc tctggcctgg ccattcattt
     4081 ctagtcagct ctaatatcag ccatctcaag ggtggtggcc attttgtctg ttttgatgct
     4141 cttgcagggc ttgggggtct taatatctgg gagagccatg cccctcactt tttcttctcc
     4201 agaagtatct ttgctcctat ggacttctgg gtctccacac aatttctgag ctgattgcct
     4261 aggttttcat gaatactgaa cagctctgtg tttggctgcc cacgccttca gctgtgtcct
     4321 ttgtc
//
