LOCUS       NM_001271047            6792 bp    mRNA    linear   ROD 08-APR-2024
DEFINITION  Rattus norvegicus KIAA0930 homolog (Kiaa0930), mRNA.
ACCESSION   NM_001271047 XM_001078167 XM_039079613 XM_343304
VERSION     NM_001271047.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6792)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On or before Jul 20, 2021 this sequence version replaced
            XM_039079613.1, NM_001271047.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR21887622.3283715.1,
                                           SRR26643293.42613.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-357               JAXUCZ010000007.1  117987245-117987601 c
            358-509             JAXUCZ010000007.1  117963766-117963917 c
            510-632             JAXUCZ010000007.1  117959787-117959909 c
            633-710             JAXUCZ010000007.1  117959626-117959703 c
            711-812             JAXUCZ010000007.1  117959200-117959301 c
            813-953             JAXUCZ010000007.1  117957975-117958115 c
            954-1145            JAXUCZ010000007.1  117957211-117957402 c
            1146-1308           JAXUCZ010000007.1  117954579-117954741 c
            1309-1467           JAXUCZ010000007.1  117953549-117953707 c
            1468-6792           JAXUCZ010000007.1  117947898-117953222 c
FEATURES             Location/Qualifiers
     source          1..6792
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..6792
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /note="KIAA0930 homolog"
                     /db_xref="GeneID:362974"
                     /db_xref="RGD:1304694"
     exon            1..357
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
     CDS             294..1508
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /codon_start=1
                     /product="uncharacterized protein KIAA0930 homolog"
                     /protein_id="NP_001257976.1"
                     /db_xref="GeneID:362974"
                     /db_xref="RGD:1304694"
                     /translation="MLRAIAEERGRLSLRREVCGLGCFKDDRIVFWTWMFSTYFMEKL
                     APRQDDMLFYVRRKRAYTGSESTADGRKAEAEPEVEVEVYRRDSKKLPGLGDPDIDWE
                     ESVCLNLILQKLDYMVTCAVCTRADGGDIHIHRKKSQQVFASPSKHPMDSKGEESKMS
                     YPNIFFMIDSFEEVFSDMTVGEGEMVCVELVASDKTNMFQGVIFQGSIRYEALKKVYD
                     NRVSVAARMAQKMSFGFYKYNNMEFVRMKGPQGKGHAEMAVSRVSTGDTSPYGTEDSS
                     PASPMHERVTSFSTPPTPERNNRPAFFSPSLKRKVPRNRIAEMKKSHSANDSEEFFRE
                     DDGGADLHNATNLRSRSLSGTGRSLVGSWLKLSRADGNFLLYAHLTYVTLPLHRILTD
                     ILEVRQKPILMT"
     exon            358..509
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
     exon            510..632
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
     exon            633..710
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
     exon            711..812
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
     exon            813..953
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
     exon            954..1145
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
     exon            1146..1308
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
     exon            1309..1467
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
     exon            1468..6792
                     /gene="Kiaa0930"
                     /gene_synonym="RGD1304694"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctcggctgg gctccgaggt ctgcggcggc ggcagcagtg gcgacgcgca caaaagcgga
       61 ttgtggcttc actggtgctc gaggcgagcg gcagcggggc acgggcggcg gggcgtgtcg
      121 ggagcccccg cgggcgcggc gcgggcgatg agccggggcc cggcatggcc tccgcgcggc
      181 cgccgggcag ggcctgtgcc tcggcgtccg cgcccgcggg gctccggcct gggccggccg
      241 cctcccggga gcccgcggac ggctgcgaaa cggaggagcg ctcgttgcag cacatgctgc
      301 gcgccatagc cgaggagcgc ggacgcctta gcctgcgccg cgaggtctgc ggcctgggtt
      361 gcttcaagga tgaccgcatc gtcttctgga cgtggatgtt ttcgacctac ttcatggaga
      421 aactggcccc caggcaggac gacatgctgt tctacgtgcg caggaagcga gcctacacag
      481 gcagtgagag cactgcggac gggaggaagg ctgaggctga gcctgaggtg gaggtcgaag
      541 tgtaccggag agactctaag aagcttccag gcctgggaga tcctgacatc gactgggagg
      601 agagtgtctg cctgaacctc atcctgcaga agctggacta catggtgacc tgtgctgtgt
      661 gcacgcgtgc tgacgggggt gacattcaca tccataggaa gaaatcgcag caagtgttcg
      721 cctcccccag caaacatccc atggacagca aaggagaaga gtccaagatg agctacccca
      781 acatcttctt catgattgac agcttcgaag aggtgttcag tgacatgaca gtgggagaag
      841 gagagatggt ctgcgttgag ctggtggcca gcgacaaaac caacatgttc cagggtgtca
      901 tctttcaggg ttccatccgc tatgaggcac tcaagaaggt gtacgacaac cgcgtgagtg
      961 tggctgctcg catggcccag aagatgtcat ttggcttcta caagtacaac aacatggagt
     1021 ttgtgcgcat gaaggggcct cagggcaagg gccacgcaga gatggcagtc agccgagtgt
     1081 ccactggtga cacatccccc tatgggactg aagattcaag cccagcttcg cccatgcatg
     1141 agcgggtgac ctcctttagc accccgccca ccccagagcg aaacaaccgg cctgccttct
     1201 tctccccatc cctcaagagg aaggtgccac ggaaccgcat cgcagagatg aagaaatcac
     1261 actcagccaa tgacagcgag gagttcttcc gagaggatga cggaggagcc gacctgcaca
     1321 acgccaccaa cctgcggtct cggtccctgt ccggcacagg acggtccttg gtcggatcct
     1381 ggctgaagct aagcagagct gatggaaatt tccttctcta tgcacacttg acctacgtca
     1441 ctttgccgct gcatcggatc ttaacagaca tcctggaagt acggcagaaa cccatcttga
     1501 tgacctagtg tgtgtggagc ctgcacggag ccccggccct gcctggccct gggaatgctg
     1561 ccaagtgcct acctgtcacc gccaaccggg gtcttctgtg acaagccagc accggagcta
     1621 cagccaggca gggccactcg actcccgggg ccagggccga ctccatgaac accagcccaa
     1681 actgaagtgc ctcgtccgtc ctcctccctc gctggctctg ctcccaccct gtgcccgcgc
     1741 tcagccccct ctcctatctc tgagggcctt ctgctcccaa agagggccag aaacaccaag
     1801 agatcataga gtgtgggggc tgccagcttc cagaatgttc ttagacctcc cgacctcgac
     1861 ccccatcccc ctgctggggc tctgtgccag gccactgtcc acgcatccta cacaaagcca
     1921 gttgaagatt ttgtaatgca gtactgacga acttcagctc cagagtcagt cccagcctcg
     1981 ttctcccata gttcttgtca cagtgggtcc cagctggggg tcaggggaca tgagctgttt
     2041 gtctgctggg aatacctcac cctatgccca gctccagatt gggtctcaac ctccagctgg
     2101 gcagacaggt cccgatccca cagaatgacc tttgcttcca tccaaagaac accgccaaca
     2161 cacacacctc cgaccccgag acatcctgca gcgatctcgg ctctccggag ggacgcagaa
     2221 ttcagttctg aaggaaagtg ggagggtact tctgctgagg gatgtctgat ggggaccggg
     2281 gtggaatcct tctgggaagg ttgtaggcag aaccaccctg agccagagct tagagcgagg
     2341 ctggtgctgt cccctttgcc ccgtgctttg atcagcatgc tgggcttgtc ttcagcctgg
     2401 cttcctaggc agagaggaga ccaggctgct catgagtctg cattgtcctc ggtgggtgca
     2461 agtggccatg tgggtcatca gcccaagcct caccctggca gtgtgctcta gctgaggcct
     2521 cctctaccca actggaataa actggaagct gggcctcctg ttgctgttgg ggttagtgcc
     2581 ccagatccag agaactcagc tgtggatgta gagttcagcc cctcggggct ggagagcagg
     2641 cacgggagca tggctcccat ctggttccat tccttggtct ctgggagtgg gcactacttg
     2701 gggttttccc tagattttgt atgttgttat taaaagcgag ctattgcatt tcattctgcc
     2761 tcagtttgcc cacctgtaaa acggggctga taccacctac ctcactgaag tctccagggt
     2821 tcaagtgcat ggctgggtca gtgtttgctc acctgtcatt ctgcatggct cagttgggtc
     2881 ttagcagtgg ctgttaggtg tcgaggaagc ttgcctctcc tgcctgctct gaaataactc
     2941 cttccaaagg gacagatgat tagtgcgtaa gcttagacag gaatattgtg ctgtaacctg
     3001 ggtcccgatt ctgaccatca aagcaaattc acatcctgtc tcggaatgcc agagtacctc
     3061 aggcttatgg gtgtggtcct tcagtctagg atagccattt ctcctgtaga atgctgtccc
     3121 catagttgtt tctagagaag taacagacct gccacttgag gaacctggcc attctgtggt
     3181 ctgagcactc tggatttcta gcttaaggga aatacagcca actatgtctt ctgtggaaga
     3241 ctgaggctgt cttagactca ctgcaattcc atggcttctc ttctggggat cccctctacc
     3301 agagctcagc catactcttg gctggcctga gtacaagctc ttcccgggct atagacggta
     3361 gagtgtgcca tgcagcctgt ctctgcgtgg cacgtgaagc acactgatct gcttaggtac
     3421 cgtcaccccc tttgtagagg gggaaagcac cccagagact ggacagtggc aggaggcaaa
     3481 cttggtccaa gccccagtct atggcttgaa ccattcggtc cccgcgtacc cagccaaaca
     3541 tttatttggt cacaattccc ctttctccag agggcacttt tgagttccaa acaagttcag
     3601 aggccctgag aactggttag aattctgaca ccagaaggtc agacatggtg gtggcacagg
     3661 catgcaatcc tagcactgga gctgaggcag gaggatggag ttcctggaca gcctaggcta
     3721 cctagcaaaa ccctgtctca gagtgacaaa ggacagcaga agtacccaga atcctcctgg
     3781 ggttgacagt ttggcttctg gggccttctt taattttctt gggaacatgt ctatccttac
     3841 gcaacacaga gtgacaagga gctactggaa ttcaaatgca gctgtgttct gaggaaactt
     3901 agatgtcagt cttcaagaca ctaagaaaag agtgctgctt gctttgtgtc cctgggaggc
     3961 ggcattccag tttcttcagt gtctgtcctg cctcctgggg tcttgccggc accccgcctg
     4021 catacagggg gcagcccagg ctcccccccg ccaaagatta ttacaacaca ggcaaaaaat
     4081 aaataagcta ggtgtggtgg cagcctggtc tacattgcaa agtttaggac agccagggct
     4141 acatagtgag accctgtctt aaacattttt tttttcatta agacatccca gcccatgtat
     4201 ttagttggtc cagtctattt ctacatatat ccatatattg acagtgtcat aagtgatttt
     4261 aaatttctgg ccataactct agatgatttg agttttaggt cgtttttcat gttggctgtc
     4321 ctttcccact ttaaaatctt tgtgtcttaa catcacacag cttccctgtt tgttccctca
     4381 cctctgtatc attaaatagg actgtccctg gacacagcca ccctaaaaga taaatagaac
     4441 actcaaaagg acttgaattc gcaggcacca tgggttcaca cgtgcttcac agaagttgct
     4501 gaccctggca cggcaggtcc tgcctcatgt ggctgggcct gaagaaggcc tgggggctgg
     4561 agaccaccta taaatatctt gagcttgaac aaaagtagcc ttttagggca tctgcattag
     4621 cccttccagg gaggtagcca gagtgctgcc ctgtccctct taggtgagaa gtggtgtatc
     4681 taaaaggttt tcactgaata aatactgaca caaacctcca aacccttctc tgagcccctg
     4741 ggacagccac tggccactgt ttgaacacca cacaagttaa gtgatttgat ggcttgtggc
     4801 tggcgtggag atctgagctc tgtgacaggt agagccccac aaatggcgga agccatggag
     4861 tttggacagt ttatctgatt ccaaggtgat ttcaggccat gagctgtcaa taggattttt
     4921 tttttttttt ggtctgtttt tgagacaggg tcttctgtag cccaggctgg cttcaaactt
     4981 actgtacatc agagggtgat cttgaactaa tgaacctcct tccacctcca tgtgctggca
     5041 ttaacaggtt tctaccaccc tgctggcttt ctgctgtgct aggaataaaa cccaggactt
     5101 tgtgctactg ggcaagcact cttatcgact gggtgcaccc ctcagctctt tcttactttc
     5161 ttttgacctc agccccttcc tttgtaggtc aggaaactta gatgcaaaat tattgtatga
     5221 gaatttacat aaatggtttt tttttgctgc ttcaaaactt gtgatttcta taaaaaccat
     5281 ttcaatgaag acatgaggta gcacacatcg aatgtgctaa tatgcaaatt ttgagtggct
     5341 ttccatgaac acctgtatcc aacagaaagc ctctcaaggc aggcgctgtg gtgcctgttg
     5401 actttatgat tttgtttgag acattgcttc acattttaga gacatttaaa atgagttttc
     5461 tttgaagtgc cctgatctct atgtttcctt taatatacat gtttcacgtt aatacaaata
     5521 gcagaccaag ggtatgacct tgactttgat atcattatga aatggtaccc actggggcgg
     5581 atagaagccg tcttacacac tggtctgtga agaccttggg agggggatca tgaccaccct
     5641 aactacaagt gtgggcattt ccaaagctga tcacacgatg cattttgggc tcatttctgt
     5701 gctcccatga aaatacaccc tggcagtgtt tggactctca aaagtttcct aagagaaccc
     5761 cctaaaacca tcacattagc aggaagatgg ctggggtaga tggaagttgg aaacctaaat
     5821 gggagtttag aaaagatcct ggcaggcatc tgactgtcct tgttgctgag cagctctgaa
     5881 agaggggctg gtgagcaggc agagttgggg tggggtgggg atgaggatgg gggtgggagc
     5941 atctggctag ctcgctctag agcttgtagt catcacatca tctttcatgc atatgggttt
     6001 ctaaaacatg ccaaatgatt acgtcacaaa gaatagggcc taatataccg tatacactgg
     6061 cgttagacct tctgtggaga tggagaggac acagtaaaga atcagtcact accctagaaa
     6121 caccagtcca ggagggtttt tctgaactgg cacctccaac tacaaggagg tgggaggagg
     6181 cagtggcttg gcaggtaaac catgtcccct tgctatccac atcaaccact gggtagccct
     6241 ttcaagtggc ctgaagcctc tgtcctggaa gctggctaca gtgctggcct tctgtttccc
     6301 agccgctgtg ggaaggcagt tctgctctca ggtcttttat cctgattcat tcataccttt
     6361 caggagtcgc tgttggcctg gaagacaatg ttccccggaa aggaaaccct tccagaacac
     6421 acgtggaaga gagcaatgta aaataactcc tgtagctcac tgtacatacc catgtcagct
     6481 ggagacatca ggctttgtgc ttgttaaagg gacagagggc tgggaagaat gaggaaggaa
     6541 acgcttgctt tggggatggg ccataaagga aaggttcctg ttcttaacag tgtcacccac
     6601 ttgcctccta cagcctcatg taagccaatg ggccaccaaa ccttttctcc tctatgtgga
     6661 tggctttcat tttggaatct gactttaata aagcaattag gttgctcagt ttgaaataac
     6721 cattgtttct ggtgaacttt gattatattt tgaataaaca attttactca aaaaacaagc
     6781 caagttcaga aa
//
