LOCUS       NM_213610               1179 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus similar to human chromosome 6 open reading frame
            136 (C20h6orf136), mRNA.
ACCESSION   NM_213610 XM_215300
VERSION     NM_213610.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Hurt,P., Walter,L., Sudbrak,R., Klages,S., Muller,I., Shiina,T.,
            Inoko,H., Lehrach,H., Gunther,E., Reinhardt,R. and Himmelbauer,H.
  TITLE     The genomic sequence and comparative analysis of the rat major
            histocompatibility complex
  JOURNAL   Genome Res 14 (4), 631-639 (2004)
   PUBMED   15060004
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC088194.1.
            
            On Oct 13, 2007 this sequence version replaced NM_213610.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC088194.1, FQ215898.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132262, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1179              BC088194.1         1-1179
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1179
                     /gene="C20h6orf136"
                     /gene_synonym="RGD1302996"
                     /note="similar to human chromosome 6 open reading frame
                     136"
                     /db_xref="GeneID:294231"
                     /db_xref="RGD:1302996"
     exon            1..142
                     /gene="C20h6orf136"
                     /gene_synonym="RGD1302996"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..1006
                     /gene="C20h6orf136"
                     /gene_synonym="RGD1302996"
                     /note="hypothetical protein MGC:15854"
                     /codon_start=1
                     /product="uncharacterized protein C6orf136 homolog"
                     /protein_id="NP_998775.2"
                     /db_xref="GeneID:294231"
                     /db_xref="RGD:1302996"
                     /translation="MYRPSPGAARRLRPCLRAYQVRPQDQLSPRPIPFPPLWPHSTPP
                     TSPSFPLHRSLPPPHPPTNPLPPPLSQVQVLNSLSTVLPLRKREEGPGPDLHSGCLDG
                     LRSLFEGPPYPHPGAVIPFQAPGTSHPSSTTPSGDQSMEEHLAVMHERLRQELPTLFL
                     RSHDYTIYSMDVEFINEILNVRTKGRTFYVMSLTLCRFLAWNYFAQFRLEILQLTRHP
                     ENWTLQARWRLIGLPVHMLFLRFYRRDKEDLYRTFDAFSTFYLNSSGLICRHHLDKLM
                     PSHSPSTPVKKLLVGALVALGLSEPEPSLHLCSKT"
     exon            143..532
                     /gene="C20h6orf136"
                     /gene_synonym="RGD1302996"
                     /inference="alignment:Splign:2.1.0"
     exon            533..621
                     /gene="C20h6orf136"
                     /gene_synonym="RGD1302996"
                     /inference="alignment:Splign:2.1.0"
     exon            622..822
                     /gene="C20h6orf136"
                     /gene_synonym="RGD1302996"
                     /inference="alignment:Splign:2.1.0"
     exon            823..892
                     /gene="C20h6orf136"
                     /gene_synonym="RGD1302996"
                     /inference="alignment:Splign:2.1.0"
     exon            893..1179
                     /gene="C20h6orf136"
                     /gene_synonym="RGD1302996"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccggctccg gggcgcgctg cccggagagg agacgggacg cgggaggcgc cctctcaccc
       61 ccagaacacc atgtaccgtc cgagcccggg agccgcccgg cgcctccggc cctgcctccg
      121 cgcctaccag gtgcgacccc aggaccagct ctctcctcgg ccaataccat tcccacccct
      181 atggccccac tccactccac cgacttctcc atcttttccc cttcacaggt cactaccacc
      241 cccacatcct cctaccaacc ctcttccacc acctctctct caggtccagg ttctcaactc
      301 attgagtacg gttcttcctc tgagaaagag ggaggaggga ccaggaccgg acctacacag
      361 tggttgcctg gatgggctta ggagcctttt tgagggacct ccttaccccc atcctggggc
      421 tgtgatacct ttccaagccc ctgggacttc ccacccttcc tctaccactc catcaggaga
      481 tcagagtatg gaggaacacc tggctgtcat gcacgagaga ctaagacaag agcttcccac
      541 ccttttcctc cgctcccatg actacaccat atactcaatg gatgtggaat tcatcaatga
      601 gatcctgaac gttcgcacca agggccggac attttacgtt atgtccctga ccctttgccg
      661 cttcctggct tggaactatt ttgcacagtt ccgactggag atcttacagc tgacccgcca
      721 ccctgagaac tggaccctac aagcccgctg gcgcctgata ggtctgcccg tacacatgct
      781 gttcctgcga ttctacaggc gcgataagga ggatctttac cggacctttg atgccttttc
      841 caccttctac ctgaattcca gtggcctcat ttgtcgccat cacctggaca agctgatgcc
      901 ttcacactca ccatcaacgc ctgtgaaaaa gctgcttgtg ggagccctgg tggccctggg
      961 gctgtcagaa cctgagccca gcttacatct gtgctccaag acctgatcca gacttgggtg
     1021 aaggccgcac tgaagactgc tacgcacaaa aggaggtgga ggtagacagg aatgtcgtgc
     1081 cagctgccgc cctccactct ccttccttct tcccatcatg ctgtgtaaag ctgctgtgta
     1141 atttaacttg taaataataa agtttaagca atgatataa
//
