LOCUS       NM_001025719            1815 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus PX domain containing 1 (Pxdc1), mRNA.
ACCESSION   NM_001025719 XM_341518
VERSION     NM_001025719.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC099145.1.
            
            On Jul 22, 2005 this sequence version replaced XM_341518.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099145.1, EV771043.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p12"
     gene            1..1815
                     /gene="Pxdc1"
                     /gene_synonym="RGD1311307"
                     /note="PX domain containing 1"
                     /db_xref="GeneID:361238"
                     /db_xref="RGD:1311307"
     exon            1..414
                     /gene="Pxdc1"
                     /gene_synonym="RGD1311307"
                     /inference="alignment:Splign:2.1.0"
     CDS             159..854
                     /gene="Pxdc1"
                     /gene_synonym="RGD1311307"
                     /note="PX domain-containing protein C6orf145 homolog"
                     /codon_start=1
                     /product="PX domain-containing protein 1"
                     /protein_id="NP_001020890.1"
                     /db_xref="GeneID:361238"
                     /db_xref="RGD:1311307"
                     /translation="MASAVFEGTSLVNMFVRGCWVNGIRRLIVSRRGDEEEFFEIRTE
                     WSDRSVLYLHRSFADLGRLCKRLRDAFPEDRSELARAPLRQGLLAIKGAHDIETRLNE
                     VEKLLETVISMPCKYSRSEVVLTFFERSPLDQVLKNDNVHKIQPSFQSPVKISEIMRS
                     NGFCLANTETIVIDHSIPNGKDQLLDADSTEHLFENGGEFTSELEDGDDPAAYVTNLS
                     YYHLVPFETDILD"
     exon            415..506
                     /gene="Pxdc1"
                     /gene_synonym="RGD1311307"
                     /inference="alignment:Splign:2.1.0"
     exon            507..624
                     /gene="Pxdc1"
                     /gene_synonym="RGD1311307"
                     /inference="alignment:Splign:2.1.0"
     exon            625..736
                     /gene="Pxdc1"
                     /gene_synonym="RGD1311307"
                     /inference="alignment:Splign:2.1.0"
     exon            737..1788
                     /gene="Pxdc1"
                     /gene_synonym="RGD1311307"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caacttctac ccaccgggac tcttaacggc cgttgcgagg atcgaccgcg tcccacagag
       61 aattcctgat cgcccttgcc cagacccact ctgcccaggc ggaccccagt cgggggccga
      121 gggcgccccc ggcggcaggg gcatgcgcct cccgcggcat ggcctcggcg gtgtttgagg
      181 gcacgtcgct cgtgaacatg ttcgtgcgcg gctgctgggt gaacgggatc cgcaggctca
      241 tcgtcagccg gcgtggcgat gaggaggagt tcttcgagat ccgcaccgag tggtcggacc
      301 gcagtgtgct ctacctgcac cgcagcttcg cggacctggg ccgcctgtgc aagcgcctcc
      361 gtgacgcctt cccggaggac cggtctgaac tggcgcgtgc gccgctgcgg caagggctgc
      421 ttgccatcaa gggtgcacat gacatagaga ccaggctgaa cgaagtcgag aagctgctgg
      481 agacggtcat tagcatgccg tgcaagtatt ctaggtctga ggttgtcctc accttctttg
      541 aaagatcgcc tctggatcag gtgttaaaaa atgataacgt ccataaaatc caacccagct
      601 ttcaaagtcc tgtgaaaata tcagaaatca tgaggtccaa cggattttgt ttggcaaaca
      661 cagaaacaat agtcattgac cacagcatac ccaatgggaa ggaccagctc ctggatgcgg
      721 attccacaga gcatttgttt gagaatggtg gtgagttcac ctcagagttg gaagatggtg
      781 atgacccagc agcttacgtc accaacttgt cctattacca tctggttcca tttgagacgg
      841 acattttgga ctgagcctct ccacagggcc ttgtctgcct ctattcttga ctgcatgtcc
      901 tcttgctatc tactgtgtgt ccccaagggc caacgctgct gttcacctgg gcctctgagg
      961 gccctgaagt tcaacaggcc tgggttttta gaaagcggag gaggcacaag ggatcttgat
     1021 gaccacaggc agctctgagg gccttctccc tgcactcagc ctgcctttta tgggacacac
     1081 tattcctgca gaccatgctt cctcttgtct ctgctggctt ggggagcatt cctcttggtc
     1141 acatggccct gactccccac ttttctcttg tgtatcaaag gcactaagct tttcaagagg
     1201 atttttggta agttaccaag ttccggacct catgggcagg ggatattaag taactcagga
     1261 ctttcctgag aagaaggacg tgtgtcttct ctttttcttc tttacatctg ctccctggaa
     1321 actgggtttg gggtcagttg gaaggagagt ttacacaaca tcaagcttgg agaagattgc
     1381 tggctttagg gcggggaaaa cattcacagt ccggtgcata tgaaccaggt gtaaagtttt
     1441 cttccagaaa agagagctcc ctcctctctg ccggcacctg tcagctcttc tgccaggcag
     1501 tgatgtggtc accactgctt agggtgctca aaacccctcc tctggtaaac tccatggcat
     1561 aagtgccatg gtgaaccaga aaggaagggc tggggagtaa gggaagctta cagcttggac
     1621 cgcagaaggt ctgggtcctg caagctcatg tcttcactgt gtctactaac gaccagcact
     1681 tgctaatgta aataatagta aattattgaa aattctaatt cttttacaca gtctgttttt
     1741 aatctatttt aatgaaataa aatctattgt tctactttga tctattgaaa aaaaaaaaaa
     1801 aaaaaaaaaa aaaaa
//
