LOCUS       NM_001408900            2682 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus PWWP domain containing 4 (Pwwp4), mRNA.
ACCESSION   NM_001408900 XM_017590171
VERSION     NM_001408900.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Jun 30, 2022 this sequence version replaced XM_017590171.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360172.1422767.1,
                                           SRR26360181.2462213.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-50                JAXUCZ010000021.1  156159375-156159424
            51-155              JAXUCZ010000021.1  156159702-156159806
            156-2682            JAXUCZ010000021.1  156162931-156165457
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq37"
     gene            1..2682
                     /gene="Pwwp4"
                     /note="PWWP domain containing 4"
                     /db_xref="GeneID:690082"
                     /db_xref="RGD:1585131"
     exon            1..50
                     /gene="Pwwp4"
                     /inference="alignment:Splign:2.1.0"
     exon            51..155
                     /gene="Pwwp4"
                     /inference="alignment:Splign:2.1.0"
     exon            156..2682
                     /gene="Pwwp4"
                     /inference="alignment:Splign:2.1.0"
     CDS             341..2509
                     /gene="Pwwp4"
                     /note="PWWP domain-containing protein MUM1L1-like; PWWP
                     domain-containing DNA repair factor 3B-like; PWWP
                     domain-containing protein MUM1-like"
                     /codon_start=1
                     /product="PWWP domain-containing DNA repair factor 4"
                     /protein_id="NP_001395829.1"
                     /db_xref="GeneID:690082"
                     /db_xref="RGD:1585131"
                     /translation="MDSAEYVLCGWKGQLWPARVLSRPRTPAHSKRRGTPFLEVQILP
                     VGEKMRVRSTEVRPLTKSEIISIASLSRKEPRGSPGQSRAYRRALKVALDVLGEGTCL
                     FQGGRPGGRRTSTVAPKIPKEQASSSSSLGQRLCLRLQGRNQKGQGPSQRSPGKRGRP
                     GPVLMDSQSVPAVQGGEAQAHTAVGPPRLVMQGRVLRGTRVWPSNSEAPLGNAGGDPR
                     KRKPVTSKPRSLSAPASREGTRAKNHQHHQHHQHQQQQQQQQQQQQQQQQQQQQQQQQ
                     AASGPPRRISVSPKALKQRVRCPGLEIRAIGAQRKTALPENKDHPAPGTPKPDSKGAS
                     AACMPPIPTLRRSLRIASRKRKVRVLCTQCGLPKLGPQVHSKVTNTRFKRRRAGVPKD
                     AQATNVASAQGPSTIERGTLVWFKFQDLPFWPAVVKSVSTIDKMARVLLIEGNMQFER
                     RGIRVPLRKLKHLDCGEKISLLRRARRLYAHGINWCFSVIDHYREELACGSFLGSFID
                     YFTTQASYPLRRAIQEGDLHIDFPKVSYADLEDWEEETTPGGKGPHKKFLPDRMKAAW
                     DRANQKLVDFIVKRKGADQHLMDIVKGRKPSKWLDALWKSKREVLCIETYLEDEDQLH
                     LVARHLQEVAKEADKALLSLARGDIVRFTMEVLLPEAIICSIANLDELSYKEAEEKYL
                     RGPPVHYREKELFDKNILKAARKRSAARIQAARHPPVHTP"
ORIGIN      
        1 ctcacagact ggaggggtgg agtgactaga cagacatgca aagcgcgtag gatgaccctg
       61 tttgtgtgac agcacctcac cctggatagt tgcgatcctg cccggcccgg ccccgtgttg
      121 tctgagagag aagctgggag gcatttaagg aggaggacac gcccacacca tcctgagcaa
      181 ctgaggagtc agttcaaact tctcatccag attctggagg gaggacagca ccacagggca
      241 ggagagcaga gccagagagg accggcaggc agtcaaggtg cccagaacaa ccaaaggagt
      301 caccctgtcc tgatcagcac agccccaggg tccagtcgcc atggactctg cagagtatgt
      361 gctctgtggc tggaagggtc agctgtggcc cgcaagggtg ttgtccagac ccaggacccc
      421 agcccatagt aagaggagag ggacgccttt cctggaggtc caaatcctgc ctgtgggtga
      481 gaagatgaga gtgaggagca ccgaggtgag gcctctaacc aagtctgaaa tcataagcat
      541 tgcctccttg tcaagaaagg agccacgggg ctcaccaggg cagagcaggg catacagaag
      601 agccctcaag gtggcactag atgttctggg cgagggaacc tgcttgtttc aaggaggaag
      661 accaggcggc cgaagaacca gcacagtggc tccaaagatt ccaaaagagc aggccagctc
      721 cagctccagc ctaggccagc gcctgtgcct gcgcctccaa gggcgcaacc agaaaggcca
      781 aggcccctcc cagaggagtc ctgggaagcg tggccgccct ggccctgtgt tgatggactc
      841 acagagtgta cctgcagtgc aaggggggga agcccaggcc cacactgctg tagggccccc
      901 tcgccttgta atgcaaggga gagtgttaag aggcaccaga gtgtggccaa gtaactctga
      961 ggcacctttg ggaaatgctg gtggtgatcc aaggaagaga aagccagtaa catccaagcc
     1021 caggtctttg agtgccccgg cctccaggga gggtacccgg gctaaaaacc accagcacca
     1081 ccaacaccac caacaccagc agcagcagca gcagcagcag cagcagcagc agcagcagca
     1141 gcagcagcag cagcagcagc agcagcaggc tgcctctggg ccaccgaggc gcatctctgt
     1201 ctcacccaaa gctctcaaac aacgagttcg gtgtcctggc ctagagatcc gggcaatagg
     1261 agcccaaagg aagaccgccc tcccagagaa caaggaccat cctgccccgg gaaccccaaa
     1321 gcctgactca aagggggcat cggcagcctg catgcctcca atcccaacgc tgcggaggtc
     1381 actccgcata gctagccgaa aaaggaaggt ccgtgtgctg tgcacacagt gcgggctccc
     1441 aaaactggga ccccaagtgc actcaaaggt gactaacacc aggttcaaga ggagaagggc
     1501 cggagttcct aaagatgctc aagccaccaa cgtggcttct gcccaggggc ccagtaccat
     1561 cgagcgggga acgctggtct ggttcaaatt tcaggacctt cccttctggc cagcggtggt
     1621 caagagtgtc agcaccattg acaagatggc aagggtgctg ttgatcgagg gcaacatgca
     1681 gtttgagcgc aggggtatcc gcgtccctct ccgcaagttg aagcatctgg actgtgggga
     1741 gaaaatatca ctcttgagga gagccagaag gctgtacgcc catggcatca actggtgctt
     1801 ctcagtgatc gaccactaca gagaggagct cgcctgtggc tccttcctgg gctcctttat
     1861 tgactacttc accacccaag ccagttaccc actgaggaga gccatccagg agggtgacct
     1921 gcacatcgat ttccccaagg tgagctatgc cgacctggaa gattgggagg aggagaccac
     1981 cccaggtggg aaggggcccc acaagaaatt cctgcctgac cgcatgaagg ccgcttggga
     2041 cagagctaac cagaagctcg tggacttcat cgtgaagaga aagggggccg accagcacct
     2101 gatggacatt gtgaagggca gaaaaccgtc caagtggctg gacgctctct ggaaatcaaa
     2161 gagggaagtc ctctgtattg agacctacct ggaggacgag gaccagctgc atctcgtggc
     2221 cagacatttg caagaagtag ccaaggaagc agacaaggcc ctgctctcgc tggcaagagg
     2281 agacatagtg aggtttacga tggaggttct tcttccagaa gcaatcatct gctcgatcgc
     2341 caacctggat gagctcagct acaaggaggc agaggagaag tacctgcgtg gcccacccgt
     2401 gcattaccgt gagaaagagc tatttgacaa gaacatctta aaggcggcca ggaagagatc
     2461 tgcagccagg attcaggctg ccaggcaccc tcctgtgcac actccttaga agggagcttc
     2521 ctcctttcag ccttcacccc tgaggctccc aagacaggag acaggaagca cctccaaaca
     2581 ggaacatctg ggagaccctg tggtgtgcta tggccactgt caaagctcct cacaaagtgt
     2641 ttctttcccc ctcaaaataa atatccatgt tcatgcttgg ca
//
