LOCUS       XM_006249031            1689 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus PVR related immunoglobulin domain
            containing (Pvrig), transcript variant X1, mRNA.
ACCESSION   XM_006249031
VERSION     XM_006249031.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006249031.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006249031.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1689
                     /gene="Pvrig"
                     /note="PVR related immunoglobulin domain containing;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 40 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:680923"
                     /db_xref="RGD:1585866"
     CDS             398..1096
                     /gene="Pvrig"
                     /codon_start=1
                     /product="transmembrane protein PVRIG isoform X1"
                     /protein_id="XP_006249093.1"
                     /db_xref="GeneID:680923"
                     /db_xref="RGD:1585866"
                     /translation="MAQMQTLVLFSTLLILCVSAASPEVWVQVQMEATNLSFFSVHCG
                     VLGCNHISLVTVSWKGFVDARETKLAVLHPEFGTQQWAPASQAHWETPISISVTLTLE
                     QSKARSSLANTTFCCEFVTFPHGSRVACRDLHSSDPGVSGERREIGRTLTLAAHLTLF
                     SVSRTLCPDSSPQSSGRSGRDLGNLRVFPVWFHLYTMSPVVAEASVFQKISVVPQQNP
                     GTDGDSSRLEGWCL"
ORIGIN      
        1 ctcctgactg cctccccaac agctttcctg attacaggat cttgcaatct ccagttgctc
       61 tgtttcctgt cccttagctg ggtagggctg gatgggataa gggctaagtt tctcaggagc
      121 agccatgcat gtctcttcct ctctctgagg cacaaagatg gttgacctca atgacccttg
      181 tagccttccc cattactgta ggtctaggga gtggcaagca aagcctggta ctgtaacttt
      241 aagtgggaga acccattacc atgagttcac taccactggg gcatacaaaa ggaaataagg
      301 ctaggttgtg ggaaagtacc acagtacctc taactgctga caatgtgcaa acttctgcca
      361 tgagaacagg aacacacaag ctgtccctgc aacaaatatg gcccagatgc agacactggt
      421 cctgttttca acattactga tcctctgtgt ctcagcagcg agccctgaag tgtgggtgca
      481 agtccagatg gaggccacca acctctcatt cttctcagtt cactgtgggg ttttaggatg
      541 taaccacatc tccctggtaa cagtgagctg gaaaggattt gttgatgcta gagagaccaa
      601 actagctgtt ttacatccag aatttggcac ccagcagtgg gctcctgcca gccaggccca
      661 ctgggaaacc ccaattagca tctctgtcac tctgaccctg gaacaatcca aagcaagaag
      721 ctccctagcc aacactacat tctgctgcga gtttgttacc ttccctcatg gttccagggt
      781 ggcctgtaga gacctccata gctcagatcc aggtgtgtct ggggagagga gggagatagg
      841 gaggacctta acactggctg cccatctgac acttttctct gtgtctagga ctctctgccc
      901 tgactccagc ccccagtctt caggcagatc tggcagggat cttgggaacc tcagggtttt
      961 tcctgtttgg tttcatcttt atactatgtc tccggtggtg gcagaggcat cggtgttcca
     1021 gaaaatctca gttgtccctc agcagaaccc aggcacagat ggagactcca gtaggcttga
     1081 aggatggtgt ctgtagcagg ataccaggga cttggggtct catctgactc tccatccccc
     1141 acagcccacc aaaaccatcc ctggccactg gccactctcc accaccccaa tcccttcccc
     1201 taaaacccca ccatcctgtt cagcagctct gtatgaggct gtagtccatt ctgatcaaca
     1261 cctgccccag tgcatatcac tccccactag tgactcagtc agcccccatg cccgtttcct
     1321 cagcttcccc atttggcctc tatacagggc agcttcatct tcgttgataa tggactgtat
     1381 actctggcat gagtgaaact tccccacatt cttcccaact tccaccaact gtctggagca
     1441 cagtaccctt tgggacatgt acctactggt gtcttcatgc tggccaccag gcctctccat
     1501 ggaccttgct ctactcttag gcctctgata agtgccagga tgtggttagc atgtgggcat
     1561 gtacggacac aggtgtgagt ggaagagtat gacaaaggcc cggttacatc ctgttttgca
     1621 cacatttcca accattcaga tggtgtcttt aatcatgcca ttaaagtggt ctttttgttt
     1681 tggacgtta
//
