LOCUS       NM_001399255             939 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus peptidyl-tRNA hydrolase 1 homolog (Ptrh1), mRNA.
ACCESSION   NM_001399255 XM_003749449
VERSION     NM_001399255.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000115.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001399255.2.
            
            On Jan 5, 2022 this sequence version replaced XM_003749449.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ220792.1, DV215237.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132262, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-81                JACYVU010000115.1  9521755-9521835
            82-301              JACYVU010000115.1  9522224-9522443
            302-401             JACYVU010000115.1  9522639-9522738
            402-447             JACYVU010000115.1  9522907-9522952
            448-939             JACYVU010000115.1  9523051-9523542
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..939
                     /gene="Ptrh1"
                     /gene_synonym="RGD1310165"
                     /note="peptidyl-tRNA hydrolase 1 homolog"
                     /db_xref="GeneID:362113"
                     /db_xref="RGD:1310165"
     exon            1..81
                     /gene="Ptrh1"
                     /gene_synonym="RGD1310165"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..630
                     /gene="Ptrh1"
                     /gene_synonym="RGD1310165"
                     /EC_number="3.1.1.29"
                     /note="probable peptidyl-tRNA hydrolase"
                     /codon_start=1
                     /product="peptidyl-tRNA hydrolase"
                     /protein_id="NP_001386184.1"
                     /db_xref="GeneID:362113"
                     /db_xref="RGD:1310165"
                     /translation="MRRRWTLSRQVSEARFPGKRWLVAGLGNPGMPGTRHSVGMAVLG
                     QIAQRLGVAENWARDSRCAADLALAPFGDAQLVLLRPRRLMNVNGRSVAKAAELFGLS
                     AEEIYLVHDELDKPLGKLALKLGGSARGHNGVRSCISCLNSNAMPRLLVGIGRPTHPN
                     MVETHVLGCFSPEEQELLSPLMDQATDLLLDHIRARSQGPLSGL"
     exon            82..301
                     /gene="Ptrh1"
                     /gene_synonym="RGD1310165"
                     /inference="alignment:Splign:2.1.0"
     exon            302..401
                     /gene="Ptrh1"
                     /gene_synonym="RGD1310165"
                     /inference="alignment:Splign:2.1.0"
     exon            402..447
                     /gene="Ptrh1"
                     /gene_synonym="RGD1310165"
                     /inference="alignment:Splign:2.1.0"
     exon            448..939
                     /gene="Ptrh1"
                     /gene_synonym="RGD1310165"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctttttggcc ctgggatgcg gcggaggtgg accttgagcc ggcaggtttc tgaggctcgg
       61 ttccccggga agcggtggct ggtggctggc ctggggaacc ccggaatgcc tggcactcgg
      121 cacagcgtag gcatggcagt gctggggcaa atagcacagc gactgggagt ggcagagaac
      181 tgggctcgtg actcgcgctg cgctgctgac ctcgccctgg ccccattcgg ggatgctcag
      241 ctggtactgc tccggccaag gcgcctcatg aacgtcaacg ggcgcagcgt agccaaagct
      301 gcggagctgt ttgggctgag tgcggaggag atctacctgg tgcatgacga actggacaaa
      361 cccttgggaa agctggctct gaagctgggg ggcagcgcaa ggggccataa tggagtccgt
      421 tcctgcatta gctgtctgaa ctccaatgca atgccaaggc tgctggtggg catcgggcgc
      481 cccacacacc ctaatatggt ggagacccat gttctgggct gcttctcccc ggaggagcag
      541 gaactactgt ccccattgat ggatcaggcc actgacctgc tcctggacca catccgtgct
      601 cgaagccagg gaccactgtc aggcctctaa taccagtgaa tatatctacc tgtttgcttg
      661 cctgccggtg cctgcctggt ggtgcctgcc tgccagtgcc ctgaagccca gacaggacca
      721 cagaactgca atgacacatg tggtacccaa tgtttatgga acttctctgg gttgtcccag
      781 gccacttgca gattcaggga gggacagggg ccacatcagg ctttctgcag cgacttggtc
      841 tccccgtgtg taggaaaggt ctaggaaggg taaacttttt gaaccttttg agagctccag
      901 atgggtagat ctgtaagatt aaaagatact ggcttaaaa
//
