LOCUS       NM_053475               1094 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus protein tyrosine phosphatase 4A2 (Ptp4a2), mRNA.
ACCESSION   NM_053475
VERSION     NM_053475.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Gjorloff-Wingren,A., Saxena,M., Han,S., Wang,X., Alonso,A.,
            Renedo,M., Oh,P., Williams,S., Schnitzer,J. and Mustelin,T.
  TITLE     Subcellular localization of intracellular protein tyrosine
            phosphatases in T cells
  JOURNAL   Eur J Immunol 30 (8), 2412-2421 (2000)
   PUBMED   10940933
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Carter,D.A.
  TITLE     Expression of a novel rat protein tyrosine phosphatase gene
  JOURNAL   Biochim Biophys Acta 1442 (2-3), 405-408 (1998)
   PUBMED   9805001
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Nov 27, 2020 this sequence version replaced NM_053475.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ007016.1, FN804306.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-507               JAXUCZ010000005.1  147465614-147466120
            508-600             JAXUCZ010000005.1  147468952-147469044
            601-731             JAXUCZ010000005.1  147472142-147472272
            732-806             JAXUCZ010000005.1  147473558-147473632
            807-1094            JAXUCZ010000005.1  147474521-147474808
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1094
                     /gene="Ptp4a2"
                     /note="protein tyrosine phosphatase 4A2"
                     /db_xref="GeneID:85237"
                     /db_xref="RGD:619786"
     exon            1..507
                     /gene="Ptp4a2"
                     /inference="alignment:Splign:2.1.0"
     CDS             412..915
                     /gene="Ptp4a2"
                     /EC_number="3.1.3.48"
                     /note="PRL-2; protein-tyrosine phosphatase of regenerating
                     liver 2; protein tyrosine phosphatase type IVA, member 2"
                     /codon_start=1
                     /product="protein tyrosine phosphatase type IVA 2"
                     /protein_id="NP_445927.2"
                     /db_xref="GeneID:85237"
                     /db_xref="RGD:619786"
                     /translation="MNRPAPVEISYENMRFLITHNPTNATLNKFTEELKKYGVTTLVR
                     VCDATYDKAPVEKEGIHVLDWPFDDGAPPPNQIVDDWLNLLKTKFREEPGCCVAVHCV
                     AGLGRAPVLVALALIECGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFRDT
                     NGHCCVQ"
     exon            508..600
                     /gene="Ptp4a2"
                     /inference="alignment:Splign:2.1.0"
     exon            601..731
                     /gene="Ptp4a2"
                     /inference="alignment:Splign:2.1.0"
     exon            732..806
                     /gene="Ptp4a2"
                     /inference="alignment:Splign:2.1.0"
     exon            807..1094
                     /gene="Ptp4a2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaattgcaag cgtattcttt taatgactcc agtaaaatta agcatcaagt aaacaaaagt
       61 ggaaaagaac ctacactttt aacttgtctc actagtgcct aaatgtagtt taaaggctgc
      121 ttaaattttg tgtgtagttg gattttttgg aagctgaagg tatccatctg cagacattga
      181 ggcccaagtt gaatttggat tcaagtggat tcttaacact tctgcctgtg ctgaagagaa
      241 gcttcataag gaacaagcaa gttgaataga gaagatagtg atcaataaga ggcatttagt
      301 ggtcttttta atgttttctg ctgcgaaaca tttcaagatt tattgatttc ctcctccccc
      361 attcccccca ccacactcac acacgcacgc tcacactttt tatttgccat aatgaaccgt
      421 ccagcccctg tggagatctc gtacgagaac atgcgttttc tgataactca caacccaacc
      481 aatgcgactc tcaacaagtt caccgaggaa ctcaagaagt acggagtgac aactttggtc
      541 cgagtttgtg atgctaccta tgacaaagct ccagttgaaa aagaagggat ccacgttcta
      601 gactggccat ttgatgacgg agctccgccc cctaatcaga tagtagatga ttggctaaac
      661 ctgttaaaga ccaaattccg ggaagagcca ggctgctgtg tcgcagtgca ttgtgttgca
      721 ggattgggaa gggctcctgt gctagttgca cttgcactga ttgaatgcgg aatgaagtat
      781 gaagatgctg ttcagtttat aagacaaaaa agaagaggag cattcaattc caaacagctg
      841 ctttacttgg agaaataccg acctaagatg cgattacgct tcagagatac caacgggcac
      901 tgctgtgttc agtagaagca gaggaaggcc ggctggatcg tggcattaga gggaactctg
      961 ggtacctgga aatgtgaatc tggattctta cctgtgtcat caaagtagtg atggattccg
     1021 tactcctcga ctcctcatga ttgagaagaa ggcaaacgat aaagaaatcc ctctataaca
     1081 cgaataaaat gttt
//
