LOCUS       NM_001008304            1748 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus PTOV1, extended AT-hook containing adaptor
            protein (Ptov1), mRNA.
ACCESSION   NM_001008304 XM_214944
VERSION     NM_001008304.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085836.1.
            
            On Dec 16, 2004 this sequence version replaced XM_214944.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085836.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..1748
                     /gene="Ptov1"
                     /note="PTOV1, extended AT-hook containing adaptor protein"
                     /db_xref="GeneID:292888"
                     /db_xref="RGD:1306977"
     exon            1..279
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     CDS             109..1359
                     /gene="Ptov1"
                     /note="prostate tumor over expressed gene 1; prostate
                     tumor overexpressed 1"
                     /codon_start=1
                     /product="prostate tumor-overexpressed gene 1 protein
                     homolog"
                     /protein_id="NP_001008305.1"
                     /db_xref="GeneID:292888"
                     /db_xref="RGD:1306977"
                     /translation="MVRPRRAPHRSGAGGPLGGRGRPPRPLVVRAVRSRSWPAGPRGP
                     QPPRIRARSAPPMEGARVFGALGPIGPSSPGLTLGGLAVNEHRLSNKLLAWSGVLEWQ
                     EKRRPFSDSAAKLKRTLPCQAYVNQGENLETDQWPQKLIMQLIPQQLLTTLGPLFRNS
                     QLAQFHFTNRDCDSLKGLCRIMGNGFAGCMLFPHISPCEVRVLMLLYSSKKKIFMGLI
                     PYDQSGFVNAIRQVITTRKQAVGPGGVHSGPVQIVNNKFLAWSGVMEWQEPRPEPNSR
                     SKRWLPSHVYVNQGEILRTDQWPRRLFMQLIPQQLLTTLVPLFRNSRLVQFHFTKDME
                     TLKSLCRIMDNGFAGCVHFSYKASCEVRVLMLLYSSEKKIFIGLIPHDQSNFVNGIRR
                     VIANQQQVLQRSLEQEQQQRGMGG"
     exon            280..417
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            418..500
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            501..558
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            559..666
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            667..822
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            823..912
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            913..986
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            987..1044
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            1045..1149
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            1150..1347
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
     exon            1348..1723
                     /gene="Ptov1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgtccccc gccgcggtcc cgctccgctt ctccccgaag ccgcgcgccc gcgcctgtcg
       61 gtcggcggac ccgcagctcc ccgtgaggcc cacggcctcc tgctcgccat ggtccgcccg
      121 cgccgtgccc cgcaccgctc cggcgccggg ggccccctcg gaggtcgtgg ccggccaccg
      181 cggcccctgg tcgtccgcgc cgtgcgctca cgctcctggc ctgctggccc tcgaggcccg
      241 cagccgccgc ggatccgggc ccgttcggcc cctcccatgg aaggtgctcg agtctttggg
      301 gccctggggc cgatcgggcc ctcctctcct gggctgactc ttgggggact cgcagtgaat
      361 gagcaccggc tcagcaacaa actgctggcc tggagtggcg tgctggagtg gcaggagaag
      421 cgtagaccct tctcggactc cgccgcaaag ctgaagcgca ccctgccctg ccaggcctat
      481 gtgaaccagg gcgagaacct ggagacggac cagtggcccc agaagctgat catgcagctc
      541 atcccacaac agctgctgac cacactgggc cccctgttcc gaaactctca gctggcccag
      601 ttccacttca ccaacagaga ctgtgactcc ctcaagggcc tctgccgcat catgggcaat
      661 ggcttcgcgg gctgcatgct cttcccccac atttctcctt gcgaggtgcg tgtgctcatg
      721 ctcctgtact cgtctaagaa gaagatcttc atgggcctca tcccctacga ccagagtggc
      781 ttcgtcaatg ccatacggca ggtcatcacc acccgcaagc aggctgtggg ccctggaggg
      841 gtgcactctg gacctgttca gattgtcaac aacaaattct tggcatggag tggagtcatg
      901 gagtggcaag agcccaggcc tgagcccaac agccggtcca agcggtggct gccatcccac
      961 gtctatgtga accaaggaga gatcctgaga acggatcagt ggcctcggag gctcttcatg
     1021 cagctcattc cacagcagtt gctgaccacc ctcgtgccac tgttccggaa ctcacgcctg
     1081 gtacagttcc acttcactaa ggacatggag actctgaaga gcctgtgccg gatcatggac
     1141 aatggcttcg cgggctgcgt gcacttctcc tataaggcct cgtgcgaggt tcgcgtgctc
     1201 atgctcctgt actcctcgga gaagaagatc ttcattggcc tcatcccgca tgaccagagc
     1261 aactttgtca atggtatccg tcgtgtcatt gccaaccagc agcaggtcct gcagcgaagc
     1321 ctggagcagg agcagcagca gcgagggatg ggtggctagt ggactcctag gctgggcagg
     1381 tcacagtccc agacgaggcc ccagtggaga ctggtgagcg gcacttgtgt ttgtgggaag
     1441 cagcagggtg accctggcct tagacctgct gcatgagtca ctgcctcctg ttaccaatat
     1501 ccctggcaag gaatgggtgc cagggccaca gcttaagtac tgggggggca gggggcagtt
     1561 tcactagtag aagccacccc tcctactgcc tcccaggtca gatgcttctg agcaggggct
     1621 cctggggact gtacctgccc agcaacctgg aggacagcgt cctgaggtct cccaaggatg
     1681 gtccttgccc ctgtatgttt ccctaataaa gccttttaac ccaaaaaaaa aaaaaaaaaa
     1741 aaaaaaaa
//
