LOCUS       XM_039082024            5611 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus parathyroid hormone 1 receptor
            (Pth1r), transcript variant X1, mRNA.
ACCESSION   XM_039082024
VERSION     XM_039082024.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082024.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5611
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5611
                     /gene="Pth1r"
                     /gene_synonym="Pthr; Pthr1; PTHrel"
                     /note="parathyroid hormone 1 receptor; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 49 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     30 samples with support for all annotated introns"
                     /db_xref="GeneID:56813"
                     /db_xref="RGD:3442"
     CDS             115..1917
                     /gene="Pth1r"
                     /gene_synonym="Pthr; Pthr1; PTHrel"
                     /codon_start=1
                     /product="parathyroid hormone/parathyroid hormone-related
                     peptide receptor isoform X1"
                     /protein_id="XP_038937952.1"
                     /db_xref="GeneID:56813"
                     /db_xref="RGD:3442"
                     /translation="MKSPRDCERGAGLGRLSGGARHSWQGGGRGGELGVDADDVFTKE
                     EQIFLLHRAQAQCDKLLKEVLHTAANIMESDKGWTPASTSGKPRKEKASGKFYPESKE
                     NKDVPTGSRRRGRPCLPEWDNIVCWPLGAPGEVVAVPCPDYIYDFNHKGHAYRRCDRN
                     GSWEVVPGHNRTWANYSECLKFMTNETREREVFDRLGMIYTVGYSMSLASLTVAVLIL
                     AYFRRLHCTRNYIHMHMFLSFMLRAASIFVKDAVLYSGFTLDEAERLTEEELHIIAQV
                     PPPPAAAAVGYAGCRVAVTFFLYFLATNYYWILVEGLYLHSLIFMAFFSEKKYLWGFT
                     IFGWGLPAVFVAVWVGVRATLANTGCWDLSSGHKKWIIQVPILASVVLNFILFINIIR
                     VLATKLRETNAGRCDTRQQYRKLLRSTLVLVPLFGVHYTVFMALPYTEVSGTLWQIQM
                     HYEMLFNSFQGFFVAIIYCFCNGEVQAEIRKSWSRWTLALDFKRKARSGSSSYSYGPM
                     VSHTSVTNVGPRAGLSLPLSPRLPPATTNGHSQLPGHAKPGAPATETETLPVTMAVPK
                     DDGFLNGSCSGLDEEASGSARPPPLLQEEWETVM"
ORIGIN      
        1 gaggggagcg gcagacgccg aggcgaggga cgcgcgaggc gggcggcggc tcggaacagc
       61 gtccgggcgg ggggctctgg aggccaggca ggccaggggg atcccgagag ctccatgaag
      121 tctccccggg actgcgaacg gggcgctggc ttggggaggc tgtcgggggg ggcccgacat
      181 tcatggcaag gcgggggccg cggcggcgag ctcggagtgg atgcggacga tgtctttacc
      241 aaagaggaac agattttcct gctgcaccgt gcccaggcgc aatgtgacaa gctgctcaag
      301 gaagttctgc acacagcagc caacataatg gagtcagaca agggctggac accagcatct
      361 acgtcaggga agcccaggaa agagaaggca tcgggaaagt tctaccctga gtctaaagag
      421 aacaaggacg tgcccaccgg cagcaggcgc agagggcgtc cctgtctgcc cgagtgggac
      481 aacatcgttt gctggccatt aggggcacca ggtgaagtgg tggcagtacc ttgtcccgat
      541 tacatttatg acttcaatca caaaggccat gcctacagac gctgtgaccg caatggcagc
      601 tgggaggtgg ttccagggca caaccggacg tgggccaact acagcgagtg cctcaagttc
      661 atgaccaatg agacgcggga acgggaggta tttgaccgcc taggcatgat ctacaccgtg
      721 ggatactcca tgtctctcgc ctccctcacg gtggctgtgc tcatcctggc ctattttagg
      781 cggctgcact gcacgcgcaa ctacatccac atgcacatgt tcctgtcgtt tatgctgcgc
      841 gccgcgagca tcttcgtgaa ggacgctgtg ctctactctg gcttcacgct ggatgaggcc
      901 gagcgcctca cagaggaaga gttgcacatc atcgcgcagg tgccacctcc gccggccgct
      961 gccgccgtag gctacgctgg ctgccgcgtg gcggtgacct tcttcctcta cttcctggct
     1021 accaactact actggattct ggtggagggg ctgtacttgc acagcctcat cttcatggcc
     1081 tttttctcag agaagaagta cctgtggggc ttcaccatct ttggctgggg tctaccggct
     1141 gtcttcgtgg ctgtgtgggt cggtgtcaga gcaaccttgg ccaacactgg gtgctgggat
     1201 ctgagctccg ggcacaagaa gtggatcatc caggtgccca tcctggcatc tgttgtgctc
     1261 aacttcatcc tttttatcaa catcatccgg gtgcttgcca ctaagcttcg ggagaccaat
     1321 gcgggccggt gtgacaccag gcagcagtac cggaagctgc tcaggtccac gttggtgctc
     1381 gtgccgctct ttggtgtcca ctacaccgtc ttcatggcct tgccgtacac cgaggtctca
     1441 gggacattgt ggcagatcca gatgcattat gagatgctct tcaactcctt ccagggattt
     1501 tttgttgcca tcatatactg tttctgcaat ggtgaggtgc aggcagagat taggaagtca
     1561 tggagccgct ggacactggc gttggacttc aagcgcaaag cacgaagtgg gagtagcagc
     1621 tacagctatg gcccaatggt gtctcacacg agtgtgacca atgtgggccc ccgtgcagga
     1681 ctcagcctcc ccctcagccc ccgcctgcct cctgccacta ccaatggcca ctcccagctg
     1741 cctggccatg ccaagccagg ggctccagcc actgagactg aaaccctacc agtcactatg
     1801 gcggttccca aggacgatgg attccttaac ggctcctgct caggcctgga tgaggaggcc
     1861 tccgggtctg cgcggccgcc tccattgttg caggaagaat gggaaacagt catgtgactg
     1921 ggcactaggg ggctagactg ctggcctggg cacatggaca gatggaccaa gaagccagtg
     1981 tttggctggt tgtctattcg ggactggacc aggaagataa caaaaggaaa aaagaaaaaa
     2041 aaaaaaaaag gagaaggggg ctctgtgtgg cttcctgtgt tggactcgaa gaagcctagg
     2101 tctaggaagc atgagagagt ttggggaggg ctctgcacat ggttgggaga aggacccatg
     2161 gtctcattat gtaggaaggg tctgggattt ggggattcag cactgtccaa caggaggggg
     2221 actctgctct taaggcccag aaaagggctt ccaaactaac tgagtagagt acttggccta
     2281 ggacacagga aactctaggt tctattccca gcacctcata aacaaggcta gcatctttga
     2341 tctaagctct ctggagatgg agctatgggg atcagaaatt caagcacatc tttggctaca
     2401 tagataaggt gggaggtagc ttggggtaca tgagaccatg tcttacgaaa caaaataatc
     2461 attgcccaga gagggccatg tttgcaggaa tctgagggag cagccagcct tccctcttgt
     2521 catgcataca cctagagttg agcatcccta gaacaactct tcgacctgct agccaagtca
     2581 ctgcagccaa ggctgacagc agatacctca ggtccttgat tcactctgag gccctgtcac
     2641 caggtgaacc tttcccatct gacggccaca caagtggcct ctatgcataa ccacagtgcc
     2701 aaaatgggag ggggaattcc tctagcagag gttacaagga tagtgggagg tgggttgcct
     2761 ctgccctggc tctagaagct aggagtttag gctctaaggg ttagctgggg tgtgggcctg
     2821 caaggctgga catgtttact gaatacacaa aacatttgct cagtatcccc atctgacact
     2881 ccctaccccc atcctcatcc tctgggcctt cctagtcctg tcttgaacca tttatgggcc
     2941 ctcaaaaagc ctgacactga ggctacatgc ctatacacgg gctgcttggc tctctgtgcc
     3001 tcccagtttt tgtactgtct ggtgcctccg tcaagtcctc ccgttctcgg ttctaaccac
     3061 cttgcttttc ctccagttct cctccacccc aggcctgagc catctaactc aggcactggg
     3121 tgctatgaac acacactgag cacgcctcag ccaactctgt ccagcattct tggttgacca
     3181 gcaggacaaa tgaccaaagt cttcccaaag ctactgagcc aggccgagtt ggagcccaca
     3241 aacattctag aggaccactt tagagtccct gcttccatgc agaggccagg agacacacaa
     3301 gggtcagagg agacaggaga gcaggtcaga aaatcatgac aagaccatac tattgtcagg
     3361 aaagaccctg gatgagtcag tgactgagaa aggagtcctt ggctggacaa aacaccatgc
     3421 ctcgtcctgg agtatgtgct acctctgtac ggggtctgga ctgacctgtc cagtcagtgt
     3481 tacaggacgt ggattgctgg gccttcatgg ctactcactc tttccaccaa ccaacccaga
     3541 ctgctctgtc agaaggccat gacctgagaa tatccaaata gcacccccag gccagcttct
     3601 gtccccccat cagttaccat cttcccttcg gatcccccaa ataggcctgt ccttttcctt
     3661 taaaggtgtc aagtgcccta agagtccatc ctgcacgatg tacccatgtc agaccaggcc
     3721 tcctatactc agttggacac ttcttcgcaa agaccagctt cctccttggg acatttgcgg
     3781 ggcagaaaca gtcatgccct ataggttggg tatcactttt ccctggttca atgtctgaga
     3841 caaatccatc tggccccggc acgtcagccc aagactgcca tccaggagaa gttccctgac
     3901 cctggacttg tggcctctgg ccctaagctg gcttccactc agagtaaccc cccttccaag
     3961 cctggcctgg gctgtccagg tgttggcaga agtgggagcc tcagaaggcc tggcagaggg
     4021 tcagggccct gtttgccttg aacaaccacc ggagccaggt ggtcactttt ccctgcaagg
     4081 ccccacggcc cagccaagcc acagggagca cacaaacagg cccaggctgg ccagtgagta
     4141 gacaaggagc ataccccttc caccgcttcc gtcccgtcta tccaggcacc tcacaggatc
     4201 cgctggattc tagatctggt cagtgaagtg gccaggttca gcgcttaacg tgccctgagc
     4261 atgccaaaag gggaccctct ctgggcccct ctcctcagaa ccagcagtgt gagcacctaa
     4321 agggtctctc tgaagactct cagaagtaac atcccctctg agggaagaca cacagtcctg
     4381 gcctctggtg ggggctaagc ctactgttgc caactcagaa tggaatcctg ggacttcaga
     4441 tcccattgct gcacaccttc tgcctgcaag ccctgctcat ctaggacacc tggcctgcag
     4501 gctgcagtgg gcaggccgtg atagcccaca ctctccagtc ctcaccccag ggaggtgaca
     4561 gaggggcaga ccaggaggaa ggcactgagg ttcaagaggg atatccctgt gtcccagggg
     4621 tgtgagagaa ctcagccctg cagggtaccc ttaaagaggc acagccttgc ccccgggtcc
     4681 tgagaggtca ctggctctgg gactagggat gtgaagcttc cagacaactt ccaggttggg
     4741 tctttccttg tctttgatgc cttcttgacc aaccacagaa tgactctagc ctgaggctac
     4801 cacagcaaac tgaggcaggg ctggtctggg agaggtagag gagaaagctc ctgctggttt
     4861 tacacacaca cacacacaca cacacacaca cacacacaca cacacacaca cacgctgtgt
     4921 taccctggcc aagcggttac cctttctgag ccacagcttc tcaaagtcag gctctgtgca
     4981 ctctgaggcc ccacctctct ctcatgtgcg accccaggtt agcttcctgg acttcctggg
     5041 ctgggctttt gtcttcctgc cttgggcaga tcctcaagga ctcatgggta aattcatcta
     5101 caacttcctc ctagttcaac atcacagtca tgcaggccag actggaggat ggattctggg
     5161 acaggagaag gtgggctctt ggctccttca tcaacttccg tggatccagt cacttccagt
     5221 aatggccagg cataggaggc cctttgccag aatacctcta ctagtcatgt aaagtgctgg
     5281 tccatccaag tcaacttgac ccagactcta tggcatttgt gaatcaaagg gtaatgttgg
     5341 tgtggtccac acagtggttc ttgtgctcag tggccatgct gctatatact acgtgctcca
     5401 ggaagatcac ccacatcact aagaaagaag ggtgcattgt gcttggattt ccatgtgtgt
     5461 gtgaacttgt atatttactt gtatttgtgt ctgcttgtgg ttctgttggc atgtatacct
     5521 gtgtctgtct gtctgtgtgc cagtatgtat ttatatcatg tttgtatatg tctgtatgtc
     5581 tttacacata tatgtctttt agtgcatcca a
//
