LOCUS       NM_001399462             854 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus prostaglandin E synthase 3 like (Ptges3l), mRNA.
ACCESSION   NM_001399462 XM_008768221
VERSION     NM_001399462.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jan 7, 2022 this sequence version replaced XM_008768221.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM084188.1, SRR26643291.29632.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-53                JAXUCZ010000010.1  86861428-86861480   c
            54-167              JAXUCZ010000010.1  86860974-86861087   c
            168-234             JAXUCZ010000010.1  86860809-86860875   c
            235-333             JAXUCZ010000010.1  86860599-86860697   c
            334-423             JAXUCZ010000010.1  86858563-86858652   c
            424-477             JAXUCZ010000010.1  86856084-86856137   c
            478-854             JAXUCZ010000010.1  86854998-86855374   c
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..854
                     /gene="Ptges3l"
                     /note="prostaglandin E synthase 3 like"
                     /db_xref="GeneID:103693432"
                     /db_xref="RGD:9413039"
     exon            1..53
                     /gene="Ptges3l"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..495
                     /gene="Ptges3l"
                     /note="alanyl-tRNA synthetase domain containing 1-like;
                     prostaglandin E synthase 3 (cytosolic)-like"
                     /codon_start=1
                     /product="putative protein PTGES3L"
                     /protein_id="NP_001386391.1"
                     /db_xref="GeneID:103693432"
                     /db_xref="RGD:9413039"
                     /translation="MERQHARTLWYDRPKYVFMEFCVEDSTDVSVLIEDHRIVFSCRN
                     GDGVELYNEIEFYAKVNSKDSQDKRSGRSITCFVRKWKEKVPWPRLTKKDIKPVWLSV
                     DFDNWRDWEGDDEMELAQVEHYAELLNKVSTKRPPPAMDDLDDDSDN"
     exon            54..167
                     /gene="Ptges3l"
                     /inference="alignment:Splign:2.1.0"
     exon            168..234
                     /gene="Ptges3l"
                     /inference="alignment:Splign:2.1.0"
     exon            235..333
                     /gene="Ptges3l"
                     /inference="alignment:Splign:2.1.0"
     exon            334..423
                     /gene="Ptges3l"
                     /inference="alignment:Splign:2.1.0"
     exon            424..477
                     /gene="Ptges3l"
                     /inference="alignment:Splign:2.1.0"
     exon            478..854
                     /gene="Ptges3l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcctttcttg ggactccaaa agccacgggg cagcttggag ccaccatgga acggcagcac
       61 gcccggactc tgtggtacga cagacccaaa tatgttttca tggagttttg cgttgaggac
      121 agcactgacg tcagtgtgct cattgaggac caccgcatcg tgttcagctg caggaatggt
      181 gatggtgtgg agctgtacaa cgagattgag ttctatgcca aagtgaactc caaggactcc
      241 caggataagc gctctggtcg ctccattact tgttttgtga ggaaatggaa ggagaaggtg
      301 ccctggcctc gactcaccaa gaaggatata aagcccgtgt ggctctctgt ggacttcgat
      361 aactggagag actgggaagg agatgacgag atggagctgg cgcaggtgga acactatgca
      421 gagcttttga acaaggtcag cactaagaga cctccccctg ccatggatga tctggacgat
      481 gattctgaca actaactagc tctctgtgac agtggacctg gggaggaggc tgtagctacc
      541 tcctgtcgtg ctgaggagct aggatgggct gtccttcaac tacttccttg tgcatcagga
      601 tccacagaga cctcggaact cttccagaag ctctctctga agggtccctc tccatgtgtt
      661 aggtcttccc cctgggcacc taagtgtggt cctgcatcag atggggtggg gagctgacaa
      721 gtggggctgc tgacttccca ctgatttgac taagaatctg tgcttgggat gcttgggttt
      781 ttgggacacg tgtttatatg tggtaaagca aaggccaaag aagaaagaga ttataataaa
      841 ttctaggaat gatc
//
