LOCUS       NM_001106316            2190 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus phosphatidylserine synthase 2 (Ptdss2), mRNA.
ACCESSION   NM_001106316 XM_001062116 XM_215113
VERSION     NM_001106316.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Bergo,M.O., Gavino,B.J., Steenbergen,R., Sturbois,B., Parlow,A.F.,
            Sanan,D.A., Skarnes,W.C., Vance,J.E. and Young,S.G.
  TITLE     Defining the importance of phosphatidylserine synthase 2 in mice
  JOURNAL   J Biol Chem 277 (49), 47701-47708 (2002)
   PUBMED   12361952
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Stone,S.J. and Vance,J.E.
  TITLE     Phosphatidylserine synthase-1 and -2 are localized to
            mitochondria-associated membranes
  JOURNAL   J Biol Chem 275 (44), 34534-34540 (2000)
   PUBMED   10938271
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_215113.4, XM_001062116.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166496.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..2190
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /note="phosphatidylserine synthase 2"
                     /db_xref="GeneID:293620"
                     /db_xref="RGD:1307914"
     exon            1..234
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     CDS             119..1534
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /EC_number="2.7.8.29"
                     /note="ptdSer synthase 2; serine-exchange enzyme II"
                     /codon_start=1
                     /product="phosphatidylserine synthase 2"
                     /protein_id="NP_001099786.1"
                     /db_xref="GeneID:293620"
                     /db_xref="RGD:1307914"
                     /translation="MRRGERRVAGGSGSESPLLEGRRSTESEVYDDGTNTFFWRAHTL
                     TVLFILTCALGYVTLLEETPQDTAYNTKRGIVASILVFLCFGVTQAKDGPFSRPHPAY
                     WRFWLCVSVVYELFLIFILFQTVHDGRQFLKYVDPRLGVPLPERDYGGNCLIYDADNK
                     TDPFHNIWDKLDGFVPAHFIGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSE
                     CWWDHWIMDVLLCNGLGIYCGMKTLEWLSLKTYKWQGLWNIPTYKGKMKRIAFQFTPY
                     SWVRFEWKPASSLHRWLAVCGIILVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVN
                     VGGVAMREIYDFMDELKPHRKLGQQAWLVAAITVTELLIVVKYDPHTLTLSLPFYISQ
                     CWTLGSILVLTWTVWRFFLRDITMRYKETRRQKQQSHQAINNGDGHPGPEDDLPGTGT
                     AEEEGTTNDGVPAEEGPSAAS"
     exon            235..336
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            337..419
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            420..487
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            488..622
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            623..673
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            674..787
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            788..906
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            907..1021
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1022..1167
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1353
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
     exon            1354..2190
                     /gene="Ptdss2"
                     /gene_synonym="PSS-2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcactacgcg tcccacaatg cctcacggcc ccgccccact cccgcggaga ccccgccggg
       61 cagtcccgcg accccagccc accgcctgca gcctggcggg ctacgctggc tgggagccat
      121 gcggagggga gagcgcagag tcgccggagg ctcgggatct gagtctccgc tgctcgaggg
      181 ccgccgcagc accgagtccg aggtctacga tgatggcact aacaccttct tttggcgcgc
      241 ccacacctta actgtgctgt tcatcctcac ctgcgcactc ggctatgtga ccctcctaga
      301 agaaacccct caggatacag cctacaacac taagagaggt attgtggcca gtattttggt
      361 tttcttatgt tttggagtca cacaagccaa agacgggcca ttttccagac ctcatccagc
      421 ttactggcgg ttttggctgt gtgttagtgt ggtctacgag ttgtttctca tcttcatcct
      481 tttccagaca gtccatgatg gccggcagtt tctgaagtat gtggatccca ggctgggagt
      541 cccattgcca gagagggact acggtggcaa ctgcctcatc tatgatgctg acaacaagac
      601 tgaccccttc cacaacatct gggacaagct ggatggcttt gttcctgcac acttcattgg
      661 ctggtatctg aagaccctca tgatccgtga ctggtggatg tgtatgatca tcagtgtgat
      721 gttcgagttc ctggagtaca gcctggagca ccagctaccc aacttcagcg agtgctggtg
      781 ggaccattgg atcatggacg tactcctctg caacgggctg ggcatctact gtggcatgaa
      841 gaccctcgag tggctgtcct tgaagacata taagtggcag ggcctctgga acattccaac
      901 ctacaagggc aagatgaaga ggattgcctt tcagttcaca ccttatagct gggtacgctt
      961 tgagtggaag ccagcctcca gcctgcaccg ctggctggcc gtgtgtggca tcatcctggt
     1021 gttcctgctg gcagagctga acacattcta cctgaagttt gtgctttgga tgccccctga
     1081 acactatctg gtccttctgc gtctggtctt cttcgtgaac gtgggtggtg tggccatgcg
     1141 tgagatctat gacttcatgg atgaattgaa gccccacagg aagctgggcc agcaggcctg
     1201 gctggtggca gccatcacag tcacagagct gctcatcgtg gtgaagtatg acccgcacac
     1261 actcaccctg tcactgccct tctacatctc ccagtgctgg actctgggct ccatcctggt
     1321 gcttacatgg actgtctggc gcttcttcct gcgggacatc accatgaggt acaaggagac
     1381 ccggcgacag aagcagcaga gtcaccaggc catcaacaac ggggatgggc acccagggcc
     1441 ggaggatgac ctgccaggga ctggaactgc agaggaagag gggaccacca atgatggtgt
     1501 acctgctgag gaggggccct cagctgcttc atgagcctct ccctcttcac tggccgtgtg
     1561 ccatagggct gtcccatttc tcccatcctc atgctccctg cttcagagga ggtggggtta
     1621 gggcttccac actccacgag gggcacctga gtgtacatgt ttgtgtgcag gtaggtgtat
     1681 gcacatattg gctcctgaca cttggccggg gctgtgagct aaacagtgag cctgggactt
     1741 gctgtagagc aagagtcctg ctctgtcctt ctgcctggtc aatcaaggcc ctgatccatg
     1801 gtccccttgt gctcagtgtc agcacaggct aggagaggta tctcagtacc tttctccacc
     1861 ctctatgggg taggcagaag ccccatgaga ccctgcggtc ccacccaact taccgcagca
     1921 caagtgaagg atataatacc aagacagctg caaaatggtg agtctggagt cagggctgag
     1981 ccatttcctt tggagccttc ccttaaccag gactatgaac cgaggggtgt gtatgtggag
     2041 gtcacagatt ggcctctttc ggggcatcaa gtcagaaagt ctaacctgga gacctgtacc
     2101 caggtgctag ggtattgtca ccatggctcc ctgcgtttat agtcgtaccc ttgagcaaac
     2161 agaacaaata aagtaatgat gaaggtgcac
//
