LOCUS       NM_001106138            1081 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus proteasome assembly chaperone 2 (Psmg2), mRNA.
ACCESSION   NM_001106138 XM_001067079 XM_214550
VERSION     NM_001106138.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Hirano,Y., Hayashi,H., Iemura,S., Hendil,K.B., Niwa,S.,
            Kishimoto,T., Kasahara,M., Natsume,T., Tanaka,K. and Murata,S.
  TITLE     Cooperation of multiple chaperones required for the assembly of
            mammalian 20S proteasomes
  JOURNAL   Mol Cell 24 (6), 977-984 (2006)
   PUBMED   17189198
REFERENCE   3  (bases 1 to 1081)
  AUTHORS   Hirano,Y., Hendil,K.B., Yashiroda,H., Iemura,S., Nagane,R.,
            Hioki,Y., Natsume,T., Tanaka,K. and Murata,S.
  TITLE     A heterodimeric complex that promotes the assembly of mammalian 20S
            proteasomes
  JOURNAL   Nature 437 (7063), 1381-1385 (2005)
   PUBMED   16251969
REFERENCE   4  (bases 1 to 1081)
  AUTHORS   Bahar,R., O-Wang,J., Kawamura,K., Seimiya,M., Wang,Y., Hatano,M.,
            Okada,S., Tokuhisa,T., Watanabe,T. and Tagawa,M.
  TITLE     Growth retardation, polyploidy, and multinucleation induced by
            Clast3, a novel cell cycle-regulated protein
  JOURNAL   J Biol Chem 277 (42), 40012-40019 (2002)
   PUBMED   12147697
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB798672.1, DV720222.1 and BM387084.1.
            
            On Oct 13, 2007 this sequence version replaced NM_001106138.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ212569.1, SRR8487231.85577.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-409               CB798672.1         12-420
            410-452             DV720222.1         140-182
            453-1081            BM387084.1         1-629               c
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.1"
     gene            1..1081
                     /gene="Psmg2"
                     /gene_synonym="Tnfsf5ip1"
                     /note="proteasome assembly chaperone 2"
                     /db_xref="GeneID:291539"
                     /db_xref="RGD:1304867"
     exon            1..127
                     /gene="Psmg2"
                     /gene_synonym="Tnfsf5ip1"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..865
                     /gene="Psmg2"
                     /gene_synonym="Tnfsf5ip1"
                     /note="tumor necrosis factor superfamily, member 5-induced
                     protein 1; proteasome (prosome, macropain) assembly
                     chaperone 2"
                     /codon_start=1
                     /product="proteasome assembly chaperone 2"
                     /protein_id="NP_001099608.2"
                     /db_xref="GeneID:291539"
                     /db_xref="RGD:1304867"
                     /translation="MFVPCGESVPDLKNFTLLMPAVSVGNVGQLAIDLIISTLNMCKI
                     GYFYTDCLVPMVGNNPYATEEEDWNELSINAEVYSLPSKKLVVLQLRSIFIKYKSKSF
                     CEKLLAWAESSCCARIIVLSSSHSYHRTDVQLRSTPFRYLLTPCLQKSVQNKIKSLNW
                     LEMEKSRCIPEMSDSEFCIRIPGGGITKTLYEESCCKEIQMAVLLKFVSEGDNIPDAV
                     SLVEYLNEWLQIIKPCSDGPVASVLPWKIPSSWRLLFGSGLPPALF"
     exon            128..299
                     /gene="Psmg2"
                     /gene_synonym="Tnfsf5ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            300..358
                     /gene="Psmg2"
                     /gene_synonym="Tnfsf5ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            359..477
                     /gene="Psmg2"
                     /gene_synonym="Tnfsf5ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            478..651
                     /gene="Psmg2"
                     /gene_synonym="Tnfsf5ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            652..772
                     /gene="Psmg2"
                     /gene_synonym="Tnfsf5ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            773..1064
                     /gene="Psmg2"
                     /gene_synonym="Tnfsf5ip1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttctatccta aggataggta tcctagctgt cccggacagc gctccagctt ctcttacgcc
       61 cactgcagtc atgttcgttc cctgcgggga gtcggtcccc gacctaaaga acttcacact
      121 cctgatgcca gcagtatccg ttgggaatgt tggccagctt gcaatagatt tgattatttc
      181 tacactgaac atgtgtaaga ttgggtattt ctatactgat tgcctggtgc caatggttgg
      241 gaacaatcca tatgcaactg aagaagaaga ctggaatgag ctcagtataa atgctgaagt
      301 gtattcctta ccgtcaaaga agctagtggt gcttcagctc aggtccatct tcattaagta
      361 taaatccaag tcattctgtg aaaaactgct ggcctgggca gaaagtagct gctgtgccag
      421 gatcatcgtt ctctccagca gccactcata tcaccgtact gatgtacaac tccgcagtac
      481 tccctttcgg tatcttctta caccttgttt gcaaaagagt gttcaaaata aaataaagag
      541 cctaaactgg ctagaaatgg aaaagagtcg gtgcatcccc gagatgagtg attctgagtt
      601 ctgcattcgc attcccggag gtggaatcac aaaaacactc tatgaggaaa gctgttgtaa
      661 agaaatccaa atggcagttc tgctgaaatt tgtttcagaa ggggacaata tcccagatgc
      721 agtcagcctt gtggagtatc ttaatgaatg gcttcagata atcaaaccat gtagtgacgg
      781 ccccgtggcc tctgtcttgc catggaagat ccccagctct tggcggctgc tctttggcag
      841 tggacttcct cccgcactgt tctgatctgt tttcagcctt ctccctcgcc ccgcagacat
      901 cacaaaacca gctgttgggt gtgtgctgtg cagaattttg tgctgccccg gggtgtgtta
      961 gaagtgctat agtaaaacct cgaagaaaag aggttgtaaa ggttattatg cttgttatat
     1021 acaataaatg taaattctgt acaataaatt atatttacta agcaaaaaaa aaaaaaaaaa
     1081 a
//
