LOCUS       NM_001101005            1498 bp    mRNA    linear   ROD 11-DEC-2024
DEFINITION  Rattus norvegicus proteasome inhibitor subunit 1 (Psmf1), mRNA.
ACCESSION   NM_001101005 XM_001058229 XM_001058291
VERSION     NM_001101005.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1498)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 1498)
  AUTHORS   Kirk,R., Laman,H., Knowles,P.P., Murray-Rust,J., Lomonosov,M.,
            Meziane el,K. and McDonald,N.Q.
  TITLE     Structure of a conserved dimerization domain within the F-box
            protein Fbxo7 and the PI31 proteasome inhibitor
  JOURNAL   J Biol Chem 283 (32), 22325-22335 (2008)
   PUBMED   18495667
REFERENCE   3  (bases 1 to 1498)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
REFERENCE   4  (bases 1 to 1498)
  AUTHORS   McCutchen-Maloney,S.L., Matsuda,K., Shimbara,N., Binns,D.D.,
            Tanaka,K., Slaughter,C.A. and DeMartino,G.N.
  TITLE     cDNA cloning, expression, and functional characterization of PI31,
            a proline-rich inhibitor of the proteasome
  JOURNAL   J Biol Chem 275 (24), 18557-18565 (2000)
   PUBMED   10764772
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083575.1.
            
            On or before Aug 13, 2007 this sequence version replaced
            XM_001058229.1, XM_001058291.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083575.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..1498
                     /gene="Psmf1"
                     /note="proteasome inhibitor subunit 1"
                     /db_xref="GeneID:689852"
                     /db_xref="RGD:1587528"
     exon            1..184
                     /gene="Psmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            185..328
                     /gene="Psmf1"
                     /inference="alignment:Splign:2.1.0"
     CDS             200..1015
                     /gene="Psmf1"
                     /note="proteasome (prosome, macropain) inhibitor subunit
                     1"
                     /codon_start=1
                     /product="proteasome inhibitor PI31 subunit"
                     /protein_id="NP_001094475.1"
                     /db_xref="GeneID:689852"
                     /db_xref="RGD:1587528"
                     /translation="MAGLEVLFASAAPAMTCPQDALVCFLHWEVVTNGYYGLGTGDQP
                     DPNDKKSELLPAEWNSNKELYALRYESKDGARKLLLKAVSVENGMIINVLEHGTQQVA
                     DLTLNLDDYIDAEDLSDFHRTYKNSEELRSRIRSGIITPIHEQWEKVRLSSPPREFPP
                     ATAREVDPLRISSHHPHTSRQPTWRDPLSPFAVGGEDLDPFGCQRGGMIVDPLRSGFP
                     RALIDPSSGLPNRLPPGAVPPGARFDPFGPIGTSPSGPNPDHLPPPGYDDMYL"
     exon            329..481
                     /gene="Psmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            482..564
                     /gene="Psmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            565..750
                     /gene="Psmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            751..804
                     /gene="Psmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            805..963
                     /gene="Psmf1"
                     /inference="alignment:Splign:2.1.0"
     exon            964..1385
                     /gene="Psmf1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caggaactgg tggctgctgc cacctaccag tttttccttt caccctattc cctaatcagg
       61 catgggcccc tttccaccta ggtagactgg gtctaccggg gggccaggga ggcatctccc
      121 acctgctccc tgtctcagct cctcccagga ctcccagggc agacccgggc ccttgctgat
      181 gtagaagccg caaacatcca tggcgggctt ggaggttctc ttcgcgtcgg ccgcgccggc
      241 catgacctgc ccacaggacg cactcgtctg cttcttgcac tgggaagtgg tgacaaacgg
      301 ctactatggc ttgggcaccg gcgaccagcc agaccccaat gataagaagt cagaactact
      361 gccggctgag tggaacagca ataaagaact gtatgccctc cggtatgagt ctaaggacgg
      421 tgccagaaaa ctccttctga aagctgtgtc tgtggagaac ggcatgatca tcaatgtgct
      481 ggagcatggc acacagcagg tggcagactt gactctgaac ttagatgact atattgatgc
      541 agaagacctg agtgatttcc acaggaccta taagaatagt gaggagcttc ggtctcggat
      601 cagatctgga attatcacac ctatccatga gcagtgggag aaggttcgtt taagcagtcc
      661 tcctcgggag ttcccacctg ccactgccag agaggtggac ccactccgga tttcctcaca
      721 ccatcctcat actagccggc agcctacttg gcgtgatccc ctgagcccat ttgctgtcgg
      781 gggagaagac ctagacccct ttgggtgtca gagaggtggc atgattgtgg atcccctgag
      841 atccggcttc ccaagagcac ttattgaccc atcctcaggc ctcccaaacc ggcttcctcc
      901 tggtgctgtg cctccaggag ctcgctttga cccctttgga cccattggga ccagtccatc
      961 tggacctaat cctgaccatc ttcccccacc gggctacgat gacatgtacc tgtgaaggcc
     1021 tcaagaatgt aacatctcag cctccctttc actctccagg agctaccacc attggcccca
     1081 tcagcgtccg tgttcttgtg ggcttggggc agaggtctct gcccatgtgt ttgcagacct
     1141 gctggggttg tatccccaac ccttaccaga gccgaggtgc ctgctgcagc accccaccaa
     1201 gctgcatata ggtcccaagg agaaactagt gtatctcaat caccagctcc tcccacttcc
     1261 aaggaagact ccggcaacat aaaccctcca cccgatgcag tcgcggtcac agcgctataa
     1321 gaacagaatg cattttggat gttattatta agaaccaaat gtcaatacag aattcatgtt
     1381 gccgaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
