LOCUS       NM_001108697             807 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus peroxiredoxin like 2B (Prxl2b), mRNA.
ACCESSION   NM_001108697 XM_001076521 XM_342993
VERSION     NM_001108697.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Yoshikawa,K., Takei,S., Hasegawa-Ishii,S., Chiba,Y., Furukawa,A.,
            Kawamura,N., Hosokawa,M., Woodward,D.F., Watanabe,K. and Shimada,A.
  TITLE     Preferential localization of prostamide/prostaglandin F synthase in
            myelin sheaths of the central nervous system
  JOURNAL   Brain Res 1367, 22-32 (2011)
   PUBMED   20950588
REFERENCE   3  (bases 1 to 807)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   4  (bases 1 to 807)
  AUTHORS   Moriuchi,H., Koda,N., Okuda-Ashitaka,E., Daiyasu,H., Ogasawara,K.,
            Toh,H., Ito,S., Woodward,D.F. and Watanabe,K.
  TITLE     Molecular characterization of a novel type of
            prostamide/prostaglandin F synthase, belonging to the
            thioredoxin-like superfamily
  JOURNAL   J Biol Chem 283 (2), 792-801 (2008)
   PUBMED   18006499
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_342993.3, XM_001076521.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK843600.1, CB579386.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760476, SAMN06621351
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..807
                     /gene="Prxl2b"
                     /gene_synonym="Fam213b; RGD1308251"
                     /note="peroxiredoxin like 2B"
                     /db_xref="GeneID:362676"
                     /db_xref="RGD:1308251"
     exon            1..121
                     /gene="Prxl2b"
                     /gene_synonym="Fam213b; RGD1308251"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..664
                     /gene="Prxl2b"
                     /gene_synonym="Fam213b; RGD1308251"
                     /EC_number="1.11.1.20"
                     /note="prostamide/PGF synthase; prostamide/PG F synthase;
                     family with sequence similarity 213, member B"
                     /codon_start=1
                     /product="prostamide/prostaglandin F synthase"
                     /protein_id="NP_001102167.1"
                     /db_xref="GeneID:362676"
                     /db_xref="RGD:1308251"
                     /translation="MSTLDLGRVGACVLKHAVTGEAVELRSLWQEKACVVAGLRRFGC
                     MVCRWIAQDLSNLRGILDQNDVRLVGIGPEALGLQEFLDGGYFSGELYLDESKQIYKE
                     LGFKRYNSLSILPAALGKPVRDVASKAKAVGIQGNLSGDLLQSGGLLVVSKGGDRVLL
                     HFIQSSPGDYVPQENILQALGISAEVCSSKPPQCDEEVCGR"
     exon            122..326
                     /gene="Prxl2b"
                     /gene_synonym="Fam213b; RGD1308251"
                     /inference="alignment:Splign:2.1.0"
     exon            327..378
                     /gene="Prxl2b"
                     /gene_synonym="Fam213b; RGD1308251"
                     /inference="alignment:Splign:2.1.0"
     exon            379..442
                     /gene="Prxl2b"
                     /gene_synonym="Fam213b; RGD1308251"
                     /inference="alignment:Splign:2.1.0"
     exon            443..518
                     /gene="Prxl2b"
                     /gene_synonym="Fam213b; RGD1308251"
                     /inference="alignment:Splign:2.1.0"
     exon            519..637
                     /gene="Prxl2b"
                     /gene_synonym="Fam213b; RGD1308251"
                     /inference="alignment:Splign:2.1.0"
     exon            638..807
                     /gene="Prxl2b"
                     /gene_synonym="Fam213b; RGD1308251"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgagcctcc ccagggccgg gagtagggat cccggtgtag aaggggacag aggaggccat
       61 gagtacgctg gaccttggtc gcgtaggagc gtgtgtcttg aagcatgcag ttactggaga
      121 ggccgtggag ctgcggagcc tatggcagga gaaagcttgt gtggtggccg gtctgcgacg
      181 cttcggctgc atggtgtgcc gctggatcgc ccaggacctc agcaacctcc ggggcatcct
      241 ggaccaaaac gatgtgcgcc tagtgggcat agggcctgaa gccctgggtc tgcaggagtt
      301 tctggatggt ggttacttct caggagaact ctaccttgat gagagcaagc aaatctataa
      361 ggagctgggc ttcaagaggt acaacagctt aagcatcttg ccagctgccc tgggaaaacc
      421 tgttcgtgat gtagcctcca aggctaaggc tgttggcatc caggggaacc tgtctggtga
      481 cctgctgcaa agtggagggc tgctggtggt cagcaagggt ggcgacaggg tcctgttgca
      541 cttcatccag agttccccgg gtgactacgt tccccaggag aacatcctgc aggccttggg
      601 tatctctgca gaggtttgct ccagcaagcc accccagtgt gatgaagagg tgtgtgggag
      661 gtgacacgtg ccctctgaga acctggaggc atctgcgacc ttggatgcat ttggactggg
      721 ccaggacgtt gggccttgtt catctttgaa cagcaatgaa gccattaaag tgcaggccct
      781 gggcagtgag cgtctcactg cttccac
//
