LOCUS       XM_039107969             985 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine protease 58 (Prss58),
            transcript variant X3, mRNA.
ACCESSION   XM_039107969
VERSION     XM_039107969.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039107969.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..985
                     /gene="Prss58"
                     /gene_synonym="try1; Tryx3"
                     /note="serine protease 58; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 1 EST, 4 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:408204"
                     /db_xref="RGD:1303054"
     CDS             177..899
                     /gene="Prss58"
                     /gene_synonym="try1; Tryx3"
                     /codon_start=1
                     /product="putative inactive serine protease 58 isoform X1"
                     /protein_id="XP_038963897.1"
                     /db_xref="GeneID:408204"
                     /db_xref="RGD:1303054"
                     /translation="MKLVFCILSTLLGTFAYNPDHIAGTTPPYLVYLKSDYLPCTGVL
                     IHPLWVVTSAHCNLPDLRVILGITNPADTTEHDVEVSDYEKMFRHPYFSVSSISYDLM
                     LIKLRRGIKHSYYAKAVKLPQHTVPVNAMCSVSTWAYNLCDVTKEPDSLQTVNVSVIS
                     KAECHNAYKAFDIRENMICVGIVPGRRLPCKEVTAAPAVCNGVLYGILSYADGCVLRA
                     DVGIYASIFHYMPWIENIMKNN"
ORIGIN      
        1 tggatacttt tggtagcacc catttgcttc actgtctatc acttcttcca gcttgagagc
       61 tccttgaaga tagaaatgga aactttaaat ataagggtac ccaaccaaaa tcaagacata
      121 ttccaactct gagacactga gctaaactcc gtctcaaatt agctttcaac atcataatga
      181 agttagtctt ctgcattctt tcaaccctgc ttggtacctt tgcctataat ccagatcaca
      241 tagctggcac cactcccccc tacttagtct acctgaagtc tgattacttg ccctgtactg
      301 gagtcctgat ccatcctctt tgggtggtca catctgcaca ctgcaattta ccggacctcc
      361 gggtgattct tgggataaca aacccagcag ataccacaga acatgacgtg gaggtgtctg
      421 actatgagaa aatgttccgt catccatact tctcggtctc ttctatttca tatgacctta
      481 tgttaatcaa actgagaaga gggattaagc acagttacta tgcaaaagca gtcaagctac
      541 ctcaacacac tgtgcctgtg aatgccatgt gctctgtgtc tacctgggcc tacaatctat
      601 gtgacgtcac caaggaacct gactcactgc agactgtgaa cgtctctgta atctccaagg
      661 ctgagtgtca taatgcctat aaagcctttg acatccgaga aaacatgatc tgtgtgggca
      721 tcgtgccagg acggaggctg ccctgcaagg aagtcacggc tgccccagcg gtctgcaatg
      781 gggtacttta tggaatatta tcttatgcag atggctgcgt tttgagagct gatgttggca
      841 tctatgctag catctttcac tacatgccct ggattgaaaa tatcatgaaa aataactgag
      901 ctctcacaac aggaggaatt ctgaaacatg tgacaaagca tgtgcccaca tccaacctca
      961 caattaaatg gaaccatgag aggca
//
