LOCUS       XM_039084691            5679 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine protease 56 (Prss56),
            transcript variant X6, mRNA.
ACCESSION   XM_039084691
VERSION     XM_039084691.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5679
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5679
                     /gene="Prss56"
                     /note="serine protease 56; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 2 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:363274"
                     /db_xref="RGD:1563955"
     CDS             3664..5487
                     /gene="Prss56"
                     /codon_start=1
                     /product="serine protease 56"
                     /protein_id="XP_038940619.1"
                     /db_xref="GeneID:363274"
                     /db_xref="RGD:1563955"
                     /translation="MPLAMLLLLLLLLLLSPDSQTANGHPLYMRLSPSTLQVLSAQGT
                     QALQAAQRSVQWAIKHVSMEIQHRRHECQGPGRPRPQASVFQDPPPEPGPCGERRQSV
                     ANTTRAHGRIVGGSTAPLGAWPWLVRLQLGGLPLCGGVLVAASWVLTAAHCFAGASNE
                     LLWTVMLAEGPQGEQAEEVQVNRILPHPKFDPQTFHNDLALVQLWTPVNSEGPARPIC
                     LPEGSREPPAGTPCTIAGWGALFEDGPESEAVREARVPLLSADTCQKALGPGLSPSTM
                     LCAGYLAGGIDSCQGDSGGPLTCSEPGPRPREVLFGVTSWGDGCGEPGKPGVYTRVAV
                     FKDWLQEQMSAGPSTREPSCRELLNWNAREEEPFADAPGLCAFYERQCLGSESSCARL
                     ALQQCVQRRRRCELRSLAHTLLGLLRGAQELLGPRPGLRRGAPAPAHSAPSLQELPGH
                     NAREQRLYSGSRVAGAWFQKPKQERRAETKGCPGLEPLQQKLAAIQRAHAWILQIPAE
                     HLAMNFHEVLADLGSKTLTGLFRAWVRASLGDQRVVFSGLVGLEPSTLAQSLPRLLVQ
                     ALKAFRSAFLTEGEPQASWIGTEQEQRLGKEHQGQLQPPVP"
ORIGIN      
        1 acttctgctt ccatgactgg ttttggccag tggtatagac agcacccttt cctcaggaag
       61 caagagcagg actacagtgg ggtaaagcca ctgagaaggc tctagagttg tgtaaaatgg
      121 tggcacccta gggccgctcc ctcagtgttg gaaactgaca aagttacaaa gcactaagcc
      181 tcataggtag actttgctgt gtgaccctag ccaagtcaca cagcctctct gtgtgaaaag
      241 ggggcatagt cacagtaccc gtcacatagc attgcaaaga ttgcaggaat gaatcccatg
      301 cttcaaacag agctggcggg ctctaaggac catcagcatt agttacattt ttatcttaga
      361 tgctcaccaa gccacagaag tccagaccac tttagacctg gcttgttatc ccttctcttc
      421 ctcagaagca caggcctgta ggcctcaccc cttgctgggc attggaggaa ctgaaacaga
      481 gctatatctg tccccaggcc ctcctaccga agctggcgcc acagtttggg gacccagagc
      541 atgggaggct gaggccggag gagtgagggg gcaggggcgg gctgcaacta aatttgctca
      601 tctagcctgt cagtccctta atctggtccc agaggaacag cgcagaggct tcactctgga
      661 tgacaaacga gggggggaga ggcctgccct gcctggacgc tcggtcctac agtgtctgta
      721 taaccaatgt gaaccccgga gcaagtctca gcaagtacca tttctctcct tagaggagtc
      781 tcctagtggt tcccgtccag acctgggaaa gtatccaact ctctgtgcct caatatactg
      841 gtctgttaaa tgggcctcct aggaaactca gtgaagtaag caatacaaat aaatgcctta
      901 tgaggtcaca gaggtcaccc agaatcccaa ccctctgctt tgatgccctc agtctgttct
      961 ctacacttgc cgaagcacat ttgtgcagga gagccaaagc tatgagcctc cctgagtggg
     1021 gatggtcagg cagaactaaa aaggccaagc ctccatactc cccgagacag aggaaacaca
     1081 gaaaatgtgt ccaactactc aggaagctga ccctgcagag ctacacttga cccggaagaa
     1141 gttctgtacc ttgaggcgtc actacccaga atttcccggc cctcatgagg cctgcatctc
     1201 tcgcaacgag ccaccaggag gcgccccgcg cctacaaatc ctcctcaggg ccgcctacgt
     1261 gaggaagtgt ttccctgacc gcagccaggc ttccacagct gagcaggcta cagtgtggcc
     1321 aaggtcccgc cactgagcct gccaccaatg cttctccggc tcccaccaag gccaagtttc
     1381 tgctcttttc ctgagtcccc acctgcgaat gtctcagcct cattgcaagc acagcgacca
     1441 ttgctggctc tgaaacagtg agaagaggca ggggctacag cagcagggtc tggccctctg
     1501 tagccctctc catccaacac cccagattcc ttccgttcca ggtcaaccct tcttggaagc
     1561 accctcatgg acatgcccat cgacttgcct ctaaggtgat cctagttcct gtcaagttga
     1621 cggttggaca gtgaactacg gagatctgcg catggtggtc ttgtggctgg ctaaggcttc
     1681 aagtttgagg ccagccttgg caagaaggga agggagatgt agggtctgct tagccccacc
     1741 ccccccaccc cagcccttct ggcagattcc agtacaaccc tgcttctcaa tccacggatc
     1801 tgtggcaagc agcccagctt cagcacccca cactcctaga cagaaccccc acctctccag
     1861 gtccctccta aagcctaggg gaagtgggaa ggtcagagtg aaaagcaaag ctgacaaact
     1921 gaaaggaact cttagccatg aggaaggctc tcttcccagc catcccctga agtcaggtca
     1981 cccccactcc ctggggagcc ccctcccact gccaccttcc atgtcctttt tccttttcag
     2041 gggttgccac agctcccttt ctacctccct gttcattcag ttcaacagcg tcccagtgac
     2101 ctttgagacc cagagcgatg accctgacat cccctagcag gaagactgaa ctgcatcaat
     2161 tctgttaatc ttcccagcag gatagatatt gagccgccct cccagatgaa tccacatcca
     2221 ttcctcagag gctggtgtca cacagagcca catttctgag acccagggct gccaggaacc
     2281 tgctccctac attacagctt cctccctgtg tttctggaag tctcatcatt cttgggtgag
     2341 agaagagtct acttccttca gactggactc aaagcctgac ccatgctaag aaggcagagt
     2401 gaggaaagag agttctatgc tggccactct ggcccgggca gcttcagcag gcacccagga
     2461 gccacacctc tctgctaaga atttggagac cacctgagat ttacccccat gatactcgta
     2521 gataattcca atccctggtg tcattgaata cacacaacaa tctataacca gcattctctt
     2581 cactttcctg gatgcatcct gttggtggga gacgggctac atactgttcc ctttgaagag
     2641 cacacagccc ctggacacag cgtgtcctaa ttcctgcacc taaatcctta accaacatgg
     2701 ccccgctgcc agcacaaatc aaggtgccaa gggtagtttt tttttgtttg tacccaaagg
     2761 tccagccata ccccaggtgg tgactggcca ttgggacagc tgcctattta tgaaccttct
     2821 ttcaagagcc cctcctgcca gatcagggtc acggcaactg aaaacaatgc tggacacact
     2881 gagcgggcag ggatgggggt ctgggagaga ctcagaaact gctgggtcct acgctcccca
     2941 aactgggcca cagtggggcc tttcatctcc cacttgcttt tgcctcttcc caccccgcta
     3001 ccccagtgca gcaattacgg cgcaaattag aatgctttga tcatctttag aaatggccac
     3061 acggaggagg gacactggca agcaattagg ggcagagggg ctggaagttc aatggcttgc
     3121 ttagggggtg agaatgccca ggacacccac ccctatccct agctctcctc cctccaagag
     3181 tgcctgctcc agcagagcag tggactcccc agggtggcag aaacagatgg ggatctcccc
     3241 ctcccagccc ctgcccacca gtctccctct gcctggcccc cagcccaacg gtcagttttc
     3301 cttccccatc tcagcccctt tgaagcggcc gcagtaacaa gggctgcttt cacagaagta
     3361 gggagactca gagtgggatg atgggacttc aaaggtgagg gtccagcccg ctacctcatt
     3421 ccctccctga gtcctggctg ccctcccacg caccccccgc ccccgtcctc tatatagctc
     3481 cagagcatcg tttccccgag ggctcccagg aggtgagggc caggtgaggt gcagaccact
     3541 aaagataggt aacttagtgt aagacaacgg gatcaaatga tttaagggac acaaagaaac
     3601 ccaggagagg gtggagtcca ggaagaaaga gaacagggtc tcctgccttg gccccaggtc
     3661 accatgccgc tggctatgtt gttgttgctg ctgctgctgc tgctactgtc cccagactcc
     3721 cagactgcca atgggcatcc actgtacatg cgcctgtccc ccagcaccct gcaagttttg
     3781 tctgcccagg ggactcaggc attgcaggct gcccagagga gtgtccagtg ggccataaag
     3841 cacgtgtcca tggagatcca gcacagacgg catgaatgcc aaggacctgg acgccctagg
     3901 cctcaagcct cggtcttcca ggacccacca ccagagccag gtccatgtgg agaaagacgc
     3961 caaagcgttg ccaacacgac ccgggctcac ggccgcatag tcggtggcag cacggctcca
     4021 ttgggagcct ggccttggct agtgaggctg caacttgggg gcctgcctct gtgcgggggc
     4081 gttctggtgg cagcgtcctg ggtgctcacg gctgcacact gcttcgccgg tgcctcgaat
     4141 gagcttctgt ggactgtgat gctagccgag ggaccccagg gggagcaagc agaggaagtg
     4201 caggtgaatc gtatcttgcc ccaccctaag tttgacccgc agacttttca caatgaccta
     4261 gcgttggtac agctgtggac gcctgtgaac tcagaggggc ctgcgcgccc catttgccta
     4321 cccgagggtt ctcgggagcc tcctgccggc actccctgca ccatcgcagg ctggggggct
     4381 ctcttcgaag acgggcctga gtctgaggca gtgagggagg cccgcgttcc gctactcagt
     4441 gcagacacct gtcaaaaggc cctggggcct gggctgagtc ccagcaccat gctctgcgct
     4501 ggttacctgg cagggggcat cgactcatgc cagggtgact ccgggggccc tttaacctgt
     4561 tctgagcccg gcccgcgccc cagagaggtc ctctttggag tcacttcttg gggagatggc
     4621 tgtggtgagc ctgggaagcc tggggtctat acccgtgtgg ccgtgttcaa agactggctg
     4681 caggagcaga tgagcgcggg cccctccact cgcgagccta gctgcagaga acttctaaat
     4741 tggaacgctc gggaagagga gccgttcgcc gacgccccgg gcctctgtgc cttctatgag
     4801 cgccagtgcc tagggtccga gagctcctgt gcgcgcctag cgctccaaca gtgtgtgcag
     4861 cgccggcggc ggtgtgagct gcggtcactg gcgcacacgc tgctcggcct gctgcggggc
     4921 gcgcaggagc tgctcggccc ccggccaggg ctgcggcgtg gagctccagc acctgctcac
     4981 tccgctccat cgctccagga gctaccgggt cacaatgccc gcgaacagcg gttatactca
     5041 ggatcccgag ttgcaggagc ttggttccag aagccaaagc aggagcggcg cgcggaaacg
     5101 aagggctgcc ctggactgga gccactgcaa cagaagttgg cggctattca gcgagcacac
     5161 gcttggattc tacagatccc agctgagcat ttggccatga actttcatga ggtgctggca
     5221 gatctgggct ccaagacact gacaggactc ttcagagctt gggtgagggc cagcttgggg
     5281 gaccagcgtg tggtcttcag tggcctggtg ggcttggaac cttctacact ggctcagagt
     5341 ctcccccggc tcctagtgca ggccctgaag gccttccgct cagctttcct gacagaagga
     5401 gagccccagg catcctggat aggtacagaa caagaacaga ggctgggaaa ggagcaccag
     5461 ggccaactcc agcctcctgt tccctgaacc aggcgaccct gcgatggcca cactgtcctg
     5521 aaggctaaag gggctgtgtg agatgtaaca aagtctcact attccggttg atcttgtatg
     5581 tgtgaataga gtgggatcct ggacctcaca tgtcttttta aatgtgtcac cagacactca
     5641 cggctgcttt aataaatgtt atttatactc tgcctaaaa
//
