LOCUS       XM_039084690            5587 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine protease 56 (Prss56),
            transcript variant X5, mRNA.
ACCESSION   XM_039084690
VERSION     XM_039084690.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5587
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5587
                     /gene="Prss56"
                     /note="serine protease 56; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 2 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:363274"
                     /db_xref="RGD:1563955"
     CDS             3572..5395
                     /gene="Prss56"
                     /codon_start=1
                     /product="serine protease 56"
                     /protein_id="XP_038940618.1"
                     /db_xref="GeneID:363274"
                     /db_xref="RGD:1563955"
                     /translation="MPLAMLLLLLLLLLLSPDSQTANGHPLYMRLSPSTLQVLSAQGT
                     QALQAAQRSVQWAIKHVSMEIQHRRHECQGPGRPRPQASVFQDPPPEPGPCGERRQSV
                     ANTTRAHGRIVGGSTAPLGAWPWLVRLQLGGLPLCGGVLVAASWVLTAAHCFAGASNE
                     LLWTVMLAEGPQGEQAEEVQVNRILPHPKFDPQTFHNDLALVQLWTPVNSEGPARPIC
                     LPEGSREPPAGTPCTIAGWGALFEDGPESEAVREARVPLLSADTCQKALGPGLSPSTM
                     LCAGYLAGGIDSCQGDSGGPLTCSEPGPRPREVLFGVTSWGDGCGEPGKPGVYTRVAV
                     FKDWLQEQMSAGPSTREPSCRELLNWNAREEEPFADAPGLCAFYERQCLGSESSCARL
                     ALQQCVQRRRRCELRSLAHTLLGLLRGAQELLGPRPGLRRGAPAPAHSAPSLQELPGH
                     NAREQRLYSGSRVAGAWFQKPKQERRAETKGCPGLEPLQQKLAAIQRAHAWILQIPAE
                     HLAMNFHEVLADLGSKTLTGLFRAWVRASLGDQRVVFSGLVGLEPSTLAQSLPRLLVQ
                     ALKAFRSAFLTEGEPQASWIGTEQEQRLGKEHQGQLQPPVP"
ORIGIN      
        1 acttctgctt ccatgactgg ttttggccag tggtatagac agcacccttt cctcaggaag
       61 caagagcagg actacagtgg ggtaaagcca ctgagaaggc tctagagttg tgtaaaatgg
      121 tggcacccta gggccgctcc ctcagtgttg gaaactgaca aagttacaaa gcactaagcc
      181 tcataggtag actttgctgt gtgaccctag ccaagtcaca cagcctctct gtgtgaaaag
      241 ggggcatagt cacagtaccc gtcacatagc attgcaaaga ttgcaggaat gaatcccatg
      301 cttcaaacag agctggcggg ctctaaggac catcagcatt agttacattt ttatcttaga
      361 tgctcaccaa gccacagaag tccagaccac tttagacctg gcttgttatc ccttctcttc
      421 ctcagaagca caggcctgta ggcctcaccc cttgctgggc attggaggaa ctgaaacaga
      481 gctatatctg tccccaggcc ctcctaccga agctggcgcc acagtttggg gacccagagc
      541 atgggaggct gaggccggag gagtgagggg gcaggggcgg gctgcaacta aatttgctca
      601 tctagcctgt cagtccctta atctggtccc agaggaacag cgcagaggct tcactctgga
      661 tgacaaacga gggggggaga ggcctgccct gcctggacgc tcggtcctac agtgtctgta
      721 taaccaatgt gaaccccgga gcaagtctca gcaagtacca tttctctcct tagaggagtc
      781 tcctagtggt tcccgtccag acctgggaaa gtatccaact ctctgtgcct caatatactg
      841 gtctgttaaa tgggcctcct aggaaactca gtgaagtaag caatacaaat aaatgcctta
      901 tgaggtcaca gaggtcaccc agaatcccaa ccctctgctt tgatgccctc agtctgttct
      961 ctacacttgc cgaagcacat ttgtgcagga gagccaaagc tatgagcctc cctgagtggg
     1021 gatggtcagg cagaactaaa aaggccaagt tctgtacctt gaggcgtcac tacccagaat
     1081 ttcccggccc tcatgaggcc tgcatctctc gcaacgagcc accaggaggc gccccgcgcc
     1141 tacaaatcct cctcagggcc gcctacgtga ggaagtgttt ccctgaccgc agccaggctt
     1201 ccacagctga gcaggctaca gtgtggccaa ggtcccgcca ctgagcctgc caccaatgct
     1261 tctccggctc ccaccaaggc caagtttctg ctcttttcct gagtccccac ctgcgaatgt
     1321 ctcagcctca ttgcaagcac agcgaccatt gctggctctg aaacagtgag aagaggcagg
     1381 ggctacagca gcagggtctg gccctctgta gccctctcca tccaacaccc cagattcctt
     1441 ccgttccagg tcaacccttc ttggaagcac cctcatggac atgcccatcg acttgcctct
     1501 aaggtgatcc tagttcctgt caagttgacg gttggacagt gaactacgga gatctgcgca
     1561 tggtggtctt gtggctggct aaggcttcaa gtttgaggcc agccttggca agaagggaag
     1621 ggagatgtag ggtctgctta gccccacccc ccccacccca gcccttctgg cagattccag
     1681 tacaaccctg cttctcaatc cacggatctg tggcaagcag cccagcttca gcaccccaca
     1741 ctcctagaca gaacccccac ctctccaggt ccctcctaaa gcctagggga agtgggaagg
     1801 tcagagtgaa aagcaaagct gacaaactga aaggaactct tagccatgag gaaggctctc
     1861 ttcccagcca tcccctgaag tcaggtcacc cccactccct ggggagcccc ctcccactgc
     1921 caccttccat gtcctttttc cttttcaggg gttgccacag ctccctttct acctccctgt
     1981 tcattcagtt caacagcgtc ccagtgacct ttgagaccca gagcgatgac cctgacatcc
     2041 cctagcagga agactgaact gcatcaattc tgttaatctt cccagcagga tagatattga
     2101 gccgccctcc cagatgaatc cacatccatt cctcagaggc tggtgtcaca cagagccaca
     2161 tttctgagac ccagggctgc caggaacctg ctccctacat tacagcttcc tccctgtgtt
     2221 tctggaagtc tcatcattct tgggtgagag aagagtctac ttccttcaga ctggactcaa
     2281 agcctgaccc atgctaagaa ggcagagtga ggaaagagag ttctatgctg gccactctgg
     2341 cccgggcagc ttcagcaggc acccaggagc cacacctctc tgctaagaat ttggagacca
     2401 cctgagattt acccccatga tactcgtaga taattccaat ccctggtgtc attgaataca
     2461 cacaacaatc tataaccagc attctcttca ctttcctgga tgcatcctgt tggtgggaga
     2521 cgggctacat actgttccct ttgaagagca cacagcccct ggacacagcg tgtcctaatt
     2581 cctgcaccta aatccttaac caacatggcc ccgctgccag cacaaatcaa ggtgccaagg
     2641 gtagtttttt tttgtttgta cccaaaggtc cagccatacc ccaggtggtg actggccatt
     2701 gggacagctg cctatttatg aaccttcttt caagagcccc tcctgccaga tcagggtcac
     2761 ggcaactgaa aacaatgctg gacacactga gcgggcaggg atgggggtct gggagagact
     2821 cagaaactgc tgggtcctac gctccccaaa ctgggccaca gtggggcctt tcatctccca
     2881 cttgcttttg cctcttccca ccccgctacc ccagtgcagc aattacggcg caaattagaa
     2941 tgctttgatc atctttagaa atggccacac ggaggaggga cactggcaag caattagggg
     3001 cagaggggct ggaagttcaa tggcttgctt agggggtgag aatgcccagg acacccaccc
     3061 ctatccctag ctctcctccc tccaagagtg cctgctccag cagagcagtg gactccccag
     3121 ggtggcagaa acagatgggg atctccccct cccagcccct gcccaccagt ctccctctgc
     3181 ctggccccca gcccaacggt cagttttcct tccccatctc agcccctttg aagcggccgc
     3241 agtaacaagg gctgctttca cagaagtagg gagactcaga gtgggatgat gggacttcaa
     3301 aggtgagggt ccagcccgct acctcattcc ctccctgagt cctggctgcc ctcccacgca
     3361 ccccccgccc ccgtcctcta tatagctcca gagcatcgtt tccccgaggg ctcccaggag
     3421 gtgagggcca ggtgaggtgc agaccactaa agataggtaa cttagtgtaa gacaacggga
     3481 tcaaatgatt taagggacac aaagaaaccc aggagagggt ggagtccagg aagaaagaga
     3541 acagggtctc ctgccttggc cccaggtcac catgccgctg gctatgttgt tgttgctgct
     3601 gctgctgctg ctactgtccc cagactccca gactgccaat gggcatccac tgtacatgcg
     3661 cctgtccccc agcaccctgc aagttttgtc tgcccagggg actcaggcat tgcaggctgc
     3721 ccagaggagt gtccagtggg ccataaagca cgtgtccatg gagatccagc acagacggca
     3781 tgaatgccaa ggacctggac gccctaggcc tcaagcctcg gtcttccagg acccaccacc
     3841 agagccaggt ccatgtggag aaagacgcca aagcgttgcc aacacgaccc gggctcacgg
     3901 ccgcatagtc ggtggcagca cggctccatt gggagcctgg ccttggctag tgaggctgca
     3961 acttgggggc ctgcctctgt gcgggggcgt tctggtggca gcgtcctggg tgctcacggc
     4021 tgcacactgc ttcgccggtg cctcgaatga gcttctgtgg actgtgatgc tagccgaggg
     4081 accccagggg gagcaagcag aggaagtgca ggtgaatcgt atcttgcccc accctaagtt
     4141 tgacccgcag acttttcaca atgacctagc gttggtacag ctgtggacgc ctgtgaactc
     4201 agaggggcct gcgcgcccca tttgcctacc cgagggttct cgggagcctc ctgccggcac
     4261 tccctgcacc atcgcaggct ggggggctct cttcgaagac gggcctgagt ctgaggcagt
     4321 gagggaggcc cgcgttccgc tactcagtgc agacacctgt caaaaggccc tggggcctgg
     4381 gctgagtccc agcaccatgc tctgcgctgg ttacctggca gggggcatcg actcatgcca
     4441 gggtgactcc gggggccctt taacctgttc tgagcccggc ccgcgcccca gagaggtcct
     4501 ctttggagtc acttcttggg gagatggctg tggtgagcct gggaagcctg gggtctatac
     4561 ccgtgtggcc gtgttcaaag actggctgca ggagcagatg agcgcgggcc cctccactcg
     4621 cgagcctagc tgcagagaac ttctaaattg gaacgctcgg gaagaggagc cgttcgccga
     4681 cgccccgggc ctctgtgcct tctatgagcg ccagtgccta gggtccgaga gctcctgtgc
     4741 gcgcctagcg ctccaacagt gtgtgcagcg ccggcggcgg tgtgagctgc ggtcactggc
     4801 gcacacgctg ctcggcctgc tgcggggcgc gcaggagctg ctcggccccc ggccagggct
     4861 gcggcgtgga gctccagcac ctgctcactc cgctccatcg ctccaggagc taccgggtca
     4921 caatgcccgc gaacagcggt tatactcagg atcccgagtt gcaggagctt ggttccagaa
     4981 gccaaagcag gagcggcgcg cggaaacgaa gggctgccct ggactggagc cactgcaaca
     5041 gaagttggcg gctattcagc gagcacacgc ttggattcta cagatcccag ctgagcattt
     5101 ggccatgaac tttcatgagg tgctggcaga tctgggctcc aagacactga caggactctt
     5161 cagagcttgg gtgagggcca gcttggggga ccagcgtgtg gtcttcagtg gcctggtggg
     5221 cttggaacct tctacactgg ctcagagtct cccccggctc ctagtgcagg ccctgaaggc
     5281 cttccgctca gctttcctga cagaaggaga gccccaggca tcctggatag gtacagaaca
     5341 agaacagagg ctgggaaagg agcaccaggg ccaactccag cctcctgttc cctgaaccag
     5401 gcgaccctgc gatggccaca ctgtcctgaa ggctaaaggg gctgtgtgag atgtaacaaa
     5461 gtctcactat tccggttgat cttgtatgtg tgaatagagt gggatcctgg acctcacatg
     5521 tctttttaaa tgtgtcacca gacactcacg gctgctttaa taaatgttat ttatactctg
     5581 cctaaaa
//
