LOCUS       XM_039084689            5690 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine protease 56 (Prss56),
            transcript variant X4, mRNA.
ACCESSION   XM_039084689
VERSION     XM_039084689.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5690
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5690
                     /gene="Prss56"
                     /note="serine protease 56; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 2 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:363274"
                     /db_xref="RGD:1563955"
     CDS             3675..5498
                     /gene="Prss56"
                     /codon_start=1
                     /product="serine protease 56"
                     /protein_id="XP_038940617.1"
                     /db_xref="GeneID:363274"
                     /db_xref="RGD:1563955"
                     /translation="MPLAMLLLLLLLLLLSPDSQTANGHPLYMRLSPSTLQVLSAQGT
                     QALQAAQRSVQWAIKHVSMEIQHRRHECQGPGRPRPQASVFQDPPPEPGPCGERRQSV
                     ANTTRAHGRIVGGSTAPLGAWPWLVRLQLGGLPLCGGVLVAASWVLTAAHCFAGASNE
                     LLWTVMLAEGPQGEQAEEVQVNRILPHPKFDPQTFHNDLALVQLWTPVNSEGPARPIC
                     LPEGSREPPAGTPCTIAGWGALFEDGPESEAVREARVPLLSADTCQKALGPGLSPSTM
                     LCAGYLAGGIDSCQGDSGGPLTCSEPGPRPREVLFGVTSWGDGCGEPGKPGVYTRVAV
                     FKDWLQEQMSAGPSTREPSCRELLNWNAREEEPFADAPGLCAFYERQCLGSESSCARL
                     ALQQCVQRRRRCELRSLAHTLLGLLRGAQELLGPRPGLRRGAPAPAHSAPSLQELPGH
                     NAREQRLYSGSRVAGAWFQKPKQERRAETKGCPGLEPLQQKLAAIQRAHAWILQIPAE
                     HLAMNFHEVLADLGSKTLTGLFRAWVRASLGDQRVVFSGLVGLEPSTLAQSLPRLLVQ
                     ALKAFRSAFLTEGEPQASWIGTEQEQRLGKEHQGQLQPPVP"
ORIGIN      
        1 attccaccag ggtctagggc ttaccagctg gtcctctttt gttcagtccc cacctttggg
       61 taccccttac catttcagat tcttagctaa atgattgatc cttgagcaat agcctccccg
      121 tttcacagat gggaaagcag aggttcaagg agggtaagtg gctgaccaaa gacctcgaca
      181 gctacaatcc gccctggcct ggatttgaac tcaaatgctc tggcctttaa tgtcagtcac
      241 tctgctgctc tgcctccccc tctaaggacc actttgttgc taggagacag caaactggtg
      301 gttactatgg gaactaggct gatggggaag gtggaaagag ttggtgtcca gatagcaaca
      361 gaaaggctcc aggtggactt cctggcttct tccccactcc tcacacgggg gcaaacttgg
      421 gctttcagct ctgggctctg ggccctagtt cctgggggtg cagggagcag gttctaagca
      481 gtgagataaa aaggacgcat agttgcactg gacagtgtgt tgcagactaa gaaccctacg
      541 tgaggatgtg aaccctcaga tgcagcagga cgaggaacag cgcagaggct tcactctgga
      601 tgacaaacga gggggggaga ggcctgccct gcctggacgc tcggtcctac agtgtctgta
      661 taaccaatgt gaaccccgga gcaagtctca gcaagtacca tttctctcct tagaggagtc
      721 tcctagtggt tcccgtccag acctgggaaa gtatccaact ctctgtgcct caatatactg
      781 gtctgttaaa tgggcctcct aggaaactca gtgaagtaag caatacaaat aaatgcctta
      841 tgaggtcaca gaggtcaccc agaatcccaa ccctctgctt tgatgccctc agtctgttct
      901 ctacacttgc cgaagcacat ttgtgcagga gagccaaagc tatgagcctc cctgagtggg
      961 gatggtcagg cagaactaaa aaggccaaga ggaaacacag aaaatgtgtc caactactca
     1021 ggaagctgac cctgcagagc tacacttgac ccggaagaag gtgatttggg gacggaggtc
     1081 cagtgttggg gtactggagc gcagaaaagc agttcgagat ctcaaaacag agatgcccct
     1141 tctgctgcat agttctgtac cttgaggcgt cactacccag aatttcccgg ccctcatgag
     1201 gcctgcatct ctcgcaacga gccaccagga ggcgccccgc gcctacaaat cctcctcagg
     1261 gccgcctacg tgaggaagtg tttccctgac cgcagccagg cttccacagc tgagcaggct
     1321 acagtgtggc caaggtcccg ccactgagcc tgccaccaat gcttctccgg ctcccaccaa
     1381 ggccaagttt ctgctctttt cctgagtccc cacctgcgaa tgtctcagcc tcattgcaag
     1441 cacagcgacc attgctggct ctgaaacagt gagaagaggc aggggctaca gcagcagggt
     1501 ctggccctct gtagccctct ccatccaaca ccccagattc cttccgttcc aggtcaaccc
     1561 ttcttggaag caccctcatg gacatgccca tcgacttgcc tctaaggtga tcctagttcc
     1621 tgtcaagttg acggttggac agtgaactac ggagatctgc gcatggtggt cttgtggctg
     1681 gctaaggctt caagtttgag gccagccttg gcaagaaggg aagggagatg tagggtctgc
     1741 ttagccccac cccccccacc ccagcccttc tggcagattc cagtacaacc ctgcttctca
     1801 atccacggat ctgtggcaag cagcccagct tcagcacccc acactcctag acagaacccc
     1861 cacctctcca ggtccctcct aaagcctagg ggaagtggga aggtcagagt gaaaagcaaa
     1921 gctgacaaac tgaaaggaac tcttagccat gaggaaggct ctcttcccag ccatcccctg
     1981 aagtcaggtc acccccactc cctggggagc cccctcccac tgccaccttc catgtccttt
     2041 ttccttttca ggggttgcca cagctccctt tctacctccc tgttcattca gttcaacagc
     2101 gtcccagtga cctttgagac ccagagcgat gaccctgaca tcccctagca ggaagactga
     2161 actgcatcaa ttctgttaat cttcccagca ggatagatat tgagccgccc tcccagatga
     2221 atccacatcc attcctcaga ggctggtgtc acacagagcc acatttctga gacccagggc
     2281 tgccaggaac ctgctcccta cattacagct tcctccctgt gtttctggaa gtctcatcat
     2341 tcttgggtga gagaagagtc tacttccttc agactggact caaagcctga cccatgctaa
     2401 gaaggcagag tgaggaaaga gagttctatg ctggccactc tggcccgggc agcttcagca
     2461 ggcacccagg agccacacct ctctgctaag aatttggaga ccacctgaga tttaccccca
     2521 tgatactcgt agataattcc aatccctggt gtcattgaat acacacaaca atctataacc
     2581 agcattctct tcactttcct ggatgcatcc tgttggtggg agacgggcta catactgttc
     2641 cctttgaaga gcacacagcc cctggacaca gcgtgtccta attcctgcac ctaaatcctt
     2701 aaccaacatg gccccgctgc cagcacaaat caaggtgcca agggtagttt ttttttgttt
     2761 gtacccaaag gtccagccat accccaggtg gtgactggcc attgggacag ctgcctattt
     2821 atgaaccttc tttcaagagc ccctcctgcc agatcagggt cacggcaact gaaaacaatg
     2881 ctggacacac tgagcgggca gggatggggg tctgggagag actcagaaac tgctgggtcc
     2941 tacgctcccc aaactgggcc acagtggggc ctttcatctc ccacttgctt ttgcctcttc
     3001 ccaccccgct accccagtgc agcaattacg gcgcaaatta gaatgctttg atcatcttta
     3061 gaaatggcca cacggaggag ggacactggc aagcaattag gggcagaggg gctggaagtt
     3121 caatggcttg cttagggggt gagaatgccc aggacaccca cccctatccc tagctctcct
     3181 ccctccaaga gtgcctgctc cagcagagca gtggactccc cagggtggca gaaacagatg
     3241 gggatctccc cctcccagcc cctgcccacc agtctccctc tgcctggccc ccagcccaac
     3301 ggtcagtttt ccttccccat ctcagcccct ttgaagcggc cgcagtaaca agggctgctt
     3361 tcacagaagt agggagactc agagtgggat gatgggactt caaaggtgag ggtccagccc
     3421 gctacctcat tccctccctg agtcctggct gccctcccac gcaccccccg cccccgtcct
     3481 ctatatagct ccagagcatc gtttccccga gggctcccag gaggtgaggg ccaggtgagg
     3541 tgcagaccac taaagatagg taacttagtg taagacaacg ggatcaaatg atttaaggga
     3601 cacaaagaaa cccaggagag ggtggagtcc aggaagaaag agaacagggt ctcctgcctt
     3661 ggccccaggt caccatgccg ctggctatgt tgttgttgct gctgctgctg ctgctactgt
     3721 ccccagactc ccagactgcc aatgggcatc cactgtacat gcgcctgtcc cccagcaccc
     3781 tgcaagtttt gtctgcccag gggactcagg cattgcaggc tgcccagagg agtgtccagt
     3841 gggccataaa gcacgtgtcc atggagatcc agcacagacg gcatgaatgc caaggacctg
     3901 gacgccctag gcctcaagcc tcggtcttcc aggacccacc accagagcca ggtccatgtg
     3961 gagaaagacg ccaaagcgtt gccaacacga cccgggctca cggccgcata gtcggtggca
     4021 gcacggctcc attgggagcc tggccttggc tagtgaggct gcaacttggg ggcctgcctc
     4081 tgtgcggggg cgttctggtg gcagcgtcct gggtgctcac ggctgcacac tgcttcgccg
     4141 gtgcctcgaa tgagcttctg tggactgtga tgctagccga gggaccccag ggggagcaag
     4201 cagaggaagt gcaggtgaat cgtatcttgc cccaccctaa gtttgacccg cagacttttc
     4261 acaatgacct agcgttggta cagctgtgga cgcctgtgaa ctcagagggg cctgcgcgcc
     4321 ccatttgcct acccgagggt tctcgggagc ctcctgccgg cactccctgc accatcgcag
     4381 gctggggggc tctcttcgaa gacgggcctg agtctgaggc agtgagggag gcccgcgttc
     4441 cgctactcag tgcagacacc tgtcaaaagg ccctggggcc tgggctgagt cccagcacca
     4501 tgctctgcgc tggttacctg gcagggggca tcgactcatg ccagggtgac tccgggggcc
     4561 ctttaacctg ttctgagccc ggcccgcgcc ccagagaggt cctctttgga gtcacttctt
     4621 ggggagatgg ctgtggtgag cctgggaagc ctggggtcta tacccgtgtg gccgtgttca
     4681 aagactggct gcaggagcag atgagcgcgg gcccctccac tcgcgagcct agctgcagag
     4741 aacttctaaa ttggaacgct cgggaagagg agccgttcgc cgacgccccg ggcctctgtg
     4801 ccttctatga gcgccagtgc ctagggtccg agagctcctg tgcgcgccta gcgctccaac
     4861 agtgtgtgca gcgccggcgg cggtgtgagc tgcggtcact ggcgcacacg ctgctcggcc
     4921 tgctgcgggg cgcgcaggag ctgctcggcc cccggccagg gctgcggcgt ggagctccag
     4981 cacctgctca ctccgctcca tcgctccagg agctaccggg tcacaatgcc cgcgaacagc
     5041 ggttatactc aggatcccga gttgcaggag cttggttcca gaagccaaag caggagcggc
     5101 gcgcggaaac gaagggctgc cctggactgg agccactgca acagaagttg gcggctattc
     5161 agcgagcaca cgcttggatt ctacagatcc cagctgagca tttggccatg aactttcatg
     5221 aggtgctggc agatctgggc tccaagacac tgacaggact cttcagagct tgggtgaggg
     5281 ccagcttggg ggaccagcgt gtggtcttca gtggcctggt gggcttggaa ccttctacac
     5341 tggctcagag tctcccccgg ctcctagtgc aggccctgaa ggccttccgc tcagctttcc
     5401 tgacagaagg agagccccag gcatcctgga taggtacaga acaagaacag aggctgggaa
     5461 aggagcacca gggccaactc cagcctcctg ttccctgaac caggcgaccc tgcgatggcc
     5521 acactgtcct gaaggctaaa ggggctgtgt gagatgtaac aaagtctcac tattccggtt
     5581 gatcttgtat gtgtgaatag agtgggatcc tggacctcac atgtcttttt aaatgtgtca
     5641 ccagacactc acggctgctt taataaatgt tatttatact ctgcctaaaa
//
