LOCUS       XM_039084686            5771 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine protease 56 (Prss56),
            transcript variant X1, mRNA.
ACCESSION   XM_039084686
VERSION     XM_039084686.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5771
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5771
                     /gene="Prss56"
                     /note="serine protease 56; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 2 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:363274"
                     /db_xref="RGD:1563955"
     CDS             3756..5579
                     /gene="Prss56"
                     /codon_start=1
                     /product="serine protease 56"
                     /protein_id="XP_038940614.1"
                     /db_xref="GeneID:363274"
                     /db_xref="RGD:1563955"
                     /translation="MPLAMLLLLLLLLLLSPDSQTANGHPLYMRLSPSTLQVLSAQGT
                     QALQAAQRSVQWAIKHVSMEIQHRRHECQGPGRPRPQASVFQDPPPEPGPCGERRQSV
                     ANTTRAHGRIVGGSTAPLGAWPWLVRLQLGGLPLCGGVLVAASWVLTAAHCFAGASNE
                     LLWTVMLAEGPQGEQAEEVQVNRILPHPKFDPQTFHNDLALVQLWTPVNSEGPARPIC
                     LPEGSREPPAGTPCTIAGWGALFEDGPESEAVREARVPLLSADTCQKALGPGLSPSTM
                     LCAGYLAGGIDSCQGDSGGPLTCSEPGPRPREVLFGVTSWGDGCGEPGKPGVYTRVAV
                     FKDWLQEQMSAGPSTREPSCRELLNWNAREEEPFADAPGLCAFYERQCLGSESSCARL
                     ALQQCVQRRRRCELRSLAHTLLGLLRGAQELLGPRPGLRRGAPAPAHSAPSLQELPGH
                     NAREQRLYSGSRVAGAWFQKPKQERRAETKGCPGLEPLQQKLAAIQRAHAWILQIPAE
                     HLAMNFHEVLADLGSKTLTGLFRAWVRASLGDQRVVFSGLVGLEPSTLAQSLPRLLVQ
                     ALKAFRSAFLTEGEPQASWIGTEQEQRLGKEHQGQLQPPVP"
ORIGIN      
        1 acttctgctt ccatgactgg ttttggccag tggtatagac agcacccttt cctcaggaag
       61 caagagcagg actacagtgg ggtaaagcca ctgagaaggc tctagagttg tgtaaaatgg
      121 tggcacccta gggccgctcc ctcagtgttg gaaactgaca aagttacaaa gcactaagcc
      181 tcataggtag actttgctgt gtgaccctag ccaagtcaca cagcctctct gtgtgaaaag
      241 ggggcatagt cacagtaccc gtcacatagc attgcaaaga ttgcaggaat gaatcccatg
      301 cttcaaacag agctggcggg ctctaaggac catcagcatt agttacattt ttatcttaga
      361 tgctcaccaa gccacagaag tccagaccac tttagacctg gcttgttatc ccttctcttc
      421 ctcagaagca caggcctgta ggcctcaccc cttgctgggc attggaggaa ctgaaacaga
      481 gctatatctg tccccaggcc ctcctaccga agctggcgcc acagtttggg gacccagagc
      541 atgggaggct gaggccggag gagtgagggg gcaggggcgg gctgcaacta aatttgctca
      601 tctagcctgt cagtccctta atctggtccc agaggaacag cgcagaggct tcactctgga
      661 tgacaaacga gggggggaga ggcctgccct gcctggacgc tcggtcctac agtgtctgta
      721 taaccaatgt gaaccccgga gcaagtctca gcaagtacca tttctctcct tagaggagtc
      781 tcctagtggt tcccgtccag acctgggaaa gtatccaact ctctgtgcct caatatactg
      841 gtctgttaaa tgggcctcct aggaaactca gtgaagtaag caatacaaat aaatgcctta
      901 tgaggtcaca gaggtcaccc agaatcccaa ccctctgctt tgatgccctc agtctgttct
      961 ctacacttgc cgaagcacat ttgtgcagga gagccaaagc tatgagcctc cctgagtggg
     1021 gatggtcagg cagaactaaa aaggccaagc ctccatactc cccgagacag aggaaacaca
     1081 gaaaatgtgt ccaactactc aggaagctga ccctgcagag ctacacttga cccggaagaa
     1141 ggtgatttgg ggacggaggt ccagtgttgg ggtactggag cgcagaaaag cagttcgaga
     1201 tctcaaaaca gagatgcccc ttctgctgca tagttctgta ccttgaggcg tcactaccca
     1261 gaatttcccg gccctcatga ggcctgcatc tctcgcaacg agccaccagg aggcgccccg
     1321 cgcctacaaa tcctcctcag ggccgcctac gtgaggaagt gtttccctga ccgcagccag
     1381 gcttccacag ctgagcaggc tacagtgtgg ccaaggtccc gccactgagc ctgccaccaa
     1441 tgcttctccg gctcccacca aggccaagtt tctgctcttt tcctgagtcc ccacctgcga
     1501 atgtctcagc ctcattgcaa gcacagcgac cattgctggc tctgaaacag tgagaagagg
     1561 caggggctac agcagcaggg tctggccctc tgtagccctc tccatccaac accccagatt
     1621 ccttccgttc caggtcaacc cttcttggaa gcaccctcat ggacatgccc atcgacttgc
     1681 ctctaaggtg atcctagttc ctgtcaagtt gacggttgga cagtgaacta cggagatctg
     1741 cgcatggtgg tcttgtggct ggctaaggct tcaagtttga ggccagcctt ggcaagaagg
     1801 gaagggagat gtagggtctg cttagcccca ccccccccac cccagccctt ctggcagatt
     1861 ccagtacaac cctgcttctc aatccacgga tctgtggcaa gcagcccagc ttcagcaccc
     1921 cacactccta gacagaaccc ccacctctcc aggtccctcc taaagcctag gggaagtggg
     1981 aaggtcagag tgaaaagcaa agctgacaaa ctgaaaggaa ctcttagcca tgaggaaggc
     2041 tctcttccca gccatcccct gaagtcaggt cacccccact ccctggggag ccccctccca
     2101 ctgccacctt ccatgtcctt tttccttttc aggggttgcc acagctccct ttctacctcc
     2161 ctgttcattc agttcaacag cgtcccagtg acctttgaga cccagagcga tgaccctgac
     2221 atcccctagc aggaagactg aactgcatca attctgttaa tcttcccagc aggatagata
     2281 ttgagccgcc ctcccagatg aatccacatc cattcctcag aggctggtgt cacacagagc
     2341 cacatttctg agacccaggg ctgccaggaa cctgctccct acattacagc ttcctccctg
     2401 tgtttctgga agtctcatca ttcttgggtg agagaagagt ctacttcctt cagactggac
     2461 tcaaagcctg acccatgcta agaaggcaga gtgaggaaag agagttctat gctggccact
     2521 ctggcccggg cagcttcagc aggcacccag gagccacacc tctctgctaa gaatttggag
     2581 accacctgag atttaccccc atgatactcg tagataattc caatccctgg tgtcattgaa
     2641 tacacacaac aatctataac cagcattctc ttcactttcc tggatgcatc ctgttggtgg
     2701 gagacgggct acatactgtt ccctttgaag agcacacagc ccctggacac agcgtgtcct
     2761 aattcctgca cctaaatcct taaccaacat ggccccgctg ccagcacaaa tcaaggtgcc
     2821 aagggtagtt tttttttgtt tgtacccaaa ggtccagcca taccccaggt ggtgactggc
     2881 cattgggaca gctgcctatt tatgaacctt ctttcaagag cccctcctgc cagatcaggg
     2941 tcacggcaac tgaaaacaat gctggacaca ctgagcgggc agggatgggg gtctgggaga
     3001 gactcagaaa ctgctgggtc ctacgctccc caaactgggc cacagtgggg cctttcatct
     3061 cccacttgct tttgcctctt cccaccccgc taccccagtg cagcaattac ggcgcaaatt
     3121 agaatgcttt gatcatcttt agaaatggcc acacggagga gggacactgg caagcaatta
     3181 ggggcagagg ggctggaagt tcaatggctt gcttaggggg tgagaatgcc caggacaccc
     3241 acccctatcc ctagctctcc tccctccaag agtgcctgct ccagcagagc agtggactcc
     3301 ccagggtggc agaaacagat ggggatctcc ccctcccagc ccctgcccac cagtctccct
     3361 ctgcctggcc cccagcccaa cggtcagttt tccttcccca tctcagcccc tttgaagcgg
     3421 ccgcagtaac aagggctgct ttcacagaag tagggagact cagagtggga tgatgggact
     3481 tcaaaggtga gggtccagcc cgctacctca ttccctccct gagtcctggc tgccctccca
     3541 cgcacccccc gcccccgtcc tctatatagc tccagagcat cgtttccccg agggctccca
     3601 ggaggtgagg gccaggtgag gtgcagacca ctaaagatag gtaacttagt gtaagacaac
     3661 gggatcaaat gatttaaggg acacaaagaa acccaggaga gggtggagtc caggaagaaa
     3721 gagaacaggg tctcctgcct tggccccagg tcaccatgcc gctggctatg ttgttgttgc
     3781 tgctgctgct gctgctactg tccccagact cccagactgc caatgggcat ccactgtaca
     3841 tgcgcctgtc ccccagcacc ctgcaagttt tgtctgccca ggggactcag gcattgcagg
     3901 ctgcccagag gagtgtccag tgggccataa agcacgtgtc catggagatc cagcacagac
     3961 ggcatgaatg ccaaggacct ggacgcccta ggcctcaagc ctcggtcttc caggacccac
     4021 caccagagcc aggtccatgt ggagaaagac gccaaagcgt tgccaacacg acccgggctc
     4081 acggccgcat agtcggtggc agcacggctc cattgggagc ctggccttgg ctagtgaggc
     4141 tgcaacttgg gggcctgcct ctgtgcgggg gcgttctggt ggcagcgtcc tgggtgctca
     4201 cggctgcaca ctgcttcgcc ggtgcctcga atgagcttct gtggactgtg atgctagccg
     4261 agggacccca gggggagcaa gcagaggaag tgcaggtgaa tcgtatcttg ccccacccta
     4321 agtttgaccc gcagactttt cacaatgacc tagcgttggt acagctgtgg acgcctgtga
     4381 actcagaggg gcctgcgcgc cccatttgcc tacccgaggg ttctcgggag cctcctgccg
     4441 gcactccctg caccatcgca ggctgggggg ctctcttcga agacgggcct gagtctgagg
     4501 cagtgaggga ggcccgcgtt ccgctactca gtgcagacac ctgtcaaaag gccctggggc
     4561 ctgggctgag tcccagcacc atgctctgcg ctggttacct ggcagggggc atcgactcat
     4621 gccagggtga ctccgggggc cctttaacct gttctgagcc cggcccgcgc cccagagagg
     4681 tcctctttgg agtcacttct tggggagatg gctgtggtga gcctgggaag cctggggtct
     4741 atacccgtgt ggccgtgttc aaagactggc tgcaggagca gatgagcgcg ggcccctcca
     4801 ctcgcgagcc tagctgcaga gaacttctaa attggaacgc tcgggaagag gagccgttcg
     4861 ccgacgcccc gggcctctgt gccttctatg agcgccagtg cctagggtcc gagagctcct
     4921 gtgcgcgcct agcgctccaa cagtgtgtgc agcgccggcg gcggtgtgag ctgcggtcac
     4981 tggcgcacac gctgctcggc ctgctgcggg gcgcgcagga gctgctcggc ccccggccag
     5041 ggctgcggcg tggagctcca gcacctgctc actccgctcc atcgctccag gagctaccgg
     5101 gtcacaatgc ccgcgaacag cggttatact caggatcccg agttgcagga gcttggttcc
     5161 agaagccaaa gcaggagcgg cgcgcggaaa cgaagggctg ccctggactg gagccactgc
     5221 aacagaagtt ggcggctatt cagcgagcac acgcttggat tctacagatc ccagctgagc
     5281 atttggccat gaactttcat gaggtgctgg cagatctggg ctccaagaca ctgacaggac
     5341 tcttcagagc ttgggtgagg gccagcttgg gggaccagcg tgtggtcttc agtggcctgg
     5401 tgggcttgga accttctaca ctggctcaga gtctcccccg gctcctagtg caggccctga
     5461 aggccttccg ctcagctttc ctgacagaag gagagcccca ggcatcctgg ataggtacag
     5521 aacaagaaca gaggctggga aaggagcacc agggccaact ccagcctcct gttccctgaa
     5581 ccaggcgacc ctgcgatggc cacactgtcc tgaaggctaa aggggctgtg tgagatgtaa
     5641 caaagtctca ctattccggt tgatcttgta tgtgtgaata gagtgggatc ctggacctca
     5701 catgtctttt taaatgtgtc accagacact cacggctgct ttaataaatg ttatttatac
     5761 tctgcctaaa a
//
