LOCUS       XM_017596135            1418 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine protease 50 (Prss50), mRNA.
ACCESSION   XM_017596135
VERSION     XM_017596135.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017596135.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017596135.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1418
                     /gene="Prss50"
                     /note="serine protease 50; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     2 Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments, including 6 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100910205"
                     /db_xref="RGD:6499372"
     CDS             39..1313
                     /gene="Prss50"
                     /codon_start=1
                     /product="probable threonine protease PRSS50"
                     /protein_id="XP_017451624.2"
                     /db_xref="GeneID:100910205"
                     /db_xref="RGD:6499372"
                     /translation="MRRPMEGAIVEEPSGAMEPWCGAGVRGQGPQGPGVPGASRTRTR
                     ARALLLLLLLLLLLLPRRPAGCLAAGESPATLSTAVPTGPRASCASSGICPSGRLRLP
                     RQDQTSDTSQTTTPPKGMGALSTVGITGSVSKTKPGNLPLCGSSQEPDPTLRDPEAMT
                     RRWPWMVSVQTNGSHVCAGILIASQWVLAVAHCLSQNRVNYTVRVGSPWINQTTETSS
                     DVPVNQVIINSGYQSKRYWSWVGRIHDIGLLKLKWGLKYSKYVWPVCLPGLEYVVEDG
                     SLCTVTGWGYPKANGLWPQFQTLQEKEVSILNSRECEHYYHKFSRIHSLVRIISPQMI
                     CALDNDREKFCYERSGEPLVCSSDGMWYLVGVMSWGPGCKKSEAPPIFLQVSHYQLWI
                     WDRLSGEPLALPAPSRTLLLGFLLLLILLGTL"
ORIGIN      
        1 atccaggggg cgccacgcag gctgggcacc agagcgccat gaggcgcccg atggagggcg
       61 ccattgtgga ggaacctagc ggcgcaatgg agccctggtg cggggccggg gtccgtgggc
      121 agggccctca gggtcccggt gtgcctgggg cctcccgcac ccgcacccgc gcccgagccc
      181 ttctccttct gttgctgctg ctgctgctgc tcctgcctcg gcggccagca ggctgcttgg
      241 ccgcaggaga atccccggcg acgctgtcca ccgcagtccc gaccggcccc agagcctcct
      301 gtgcctccag tggcatctgt ccctcaggca ggcttcgcct tcctcggcag gaccagactt
      361 cagacacttc acagaccacg actccaccga aagggatggg ggccctgagc actgtgggga
      421 ttactgggtc cgtttctaag acaaaacccg gcaacctccc cttgtgcggc tcctcccagg
      481 agccagaccc tactctcagg gacccagaag ccatgacccg gcggtggcca tggatggtca
      541 gcgtgcagac taatggctca catgtctgtg ccggcatcct tattgcctcc cagtgggtgt
      601 tggctgtggc ccactgcttg agccagaacc gtgttaacta taccgtgagg gtggggagcc
      661 catggattaa ccagaccaca gaaaccagtt cagatgtgcc agtaaaccag gtcatcataa
      721 acagcggcta ccaatccaag cggtactggt cttgggttgg ccggatccat gacattggtc
      781 tcctcaagct caaatggggg ctcaagtaca gcaaatacgt gtggcctgtc tgcctgcctg
      841 gcctggagta tgtggtggag gacggctctc tctgcactgt gacaggctgg ggatacccca
      901 aggctaacgg cctatggccc cagttccaaa ccctccagga gaaggaagtc tctatcctga
      961 acagcaggga gtgtgagcat tactaccaca agttctccag gatccactct ctggttcgga
     1021 tcatcagccc tcagatgatc tgtgccttgg acaacgacag ggaaaagttc tgctatgaga
     1081 ggtctggtga gcccctggtc tgctcttcag acggcatgtg gtacctggta ggagtgatga
     1141 gctggggccc gggctgcaag aagagtgagg ccccgcccat ctttctccag gtctctcact
     1201 accagctgtg gatctgggac cgccttagtg gggagcccct ggcccttccg gcgccatcca
     1261 ggaccttgct tctgggtttc cttctgctcc tcatccttct gggcactctg tgacactgcc
     1321 atgtctctct ccttccttcc cctcctcctg agtgctgctt gtgggtgagg cgctcagcca
     1381 gcagggactg gcagagatta aacacttctt ttttccca
//
