LOCUS       XM_017591293            1178 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus serine protease 48 (Prss48),
            transcript variant X1, mRNA.
ACCESSION   XM_017591293
VERSION     XM_017591293.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017591293.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017591293.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1178
                     /gene="Prss48"
                     /note="serine protease 48; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     2 Proteins, and 74% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:108350052"
                     /db_xref="RGD:11436036"
     CDS             63..989
                     /gene="Prss48"
                     /codon_start=1
                     /product="serine protease 48 isoform X1"
                     /protein_id="XP_017446782.1"
                     /db_xref="GeneID:108350052"
                     /db_xref="RGD:11436036"
                     /translation="MGPAGLMVLLLLLLGAYQGSLTKQKKLQSVCGRPVYSGRIVGGQ
                     GAALGHWPWQVSLRFDSTHICGGSLISNHWVMTAAHCIKKTWFSFLYSVWLGSIDRDY
                     SSTGEEYYVSRIVIPSKHHNTDGDIALLKLSSRVTFTSLVLPICLPNISKPLTVPASC
                     WVTGWGQNQEGHYPSTLQELEVPIITGEACEQLYNPIGFFLPDLERIIKEDMLCAGEI
                     QQSKDSCKGDSGGPLSCHIDGVWTQIGVISWGLECGKNLPGVYTNVTYYQKWISSIIS
                     RAADWGGDCTHMASCFFLFPPVLLSLALLGPS"
ORIGIN      
        1 gctggcttcc gccaggggcc tgagtcccgg aagcaggaag tgctacacct gaggacagag
       61 gcatgggccc agcgggcctc atggttctgc tgctgctttt gctgggggct taccagggct
      121 ctctaaccaa acagaaaaag ctgcagtcag tatgtggacg gcctgtatac tctggacgca
      181 ttgtgggcgg ccaaggtgct gctctggggc actggccctg gcaggtcagc ctgcggtttg
      241 acagcaccca catctgtgga ggttctctca tcagtaacca ctgggtaatg acggcagcac
      301 actgcataaa aaagacctgg ttcagctttc tttacagtgt gtggcttgga tccatcgata
      361 gagattactc aagcacaggc gaggaatatt acgtgtccag aatcgtcatc cctagcaaac
      421 accacaatac agacggagat atcgccctgc tgaagctgtc ttcccgggtc accttcacgt
      481 cgctcgttct gcccatctgt ttgcccaata tctcaaagcc gctgacagtt ccagcttctt
      541 gctgggtgac tggatggggg caaaatcagg aaggtcatta cccctctacc ctccaagaac
      601 ttgaagtgcc catcattacc ggtgaggcat gtgaacaact gtacaaccca attggcttct
      661 tcctcccgga tctggagcgg atcatcaagg aagacatgct ttgtgctggt gagatacagc
      721 agagcaaaga tagctgcaag ggcgattctg gagggcctct gtcatgccac attgatggtg
      781 tctggacaca gataggtgtg ataagctggg gtttggaatg tggtaagaat cttcctggag
      841 tctacaccaa cgtgacctac taccaaaagt ggatcagttc cattatctca agagctgcgg
      901 actggggtgg cgactgcact cacatggctt cttgtttctt cttgttccct cctgtattac
      961 tttctctggc tctcctggga ccctcctgag cctttggccc tagcataaca ccaagacagc
     1021 acaagagcgg acgctgctgg gggactaacg ggaggggtcg agtattgaat aaagcttagc
     1081 agcgaactca tgagacagct gctgggatcc ctggataact agctttatgt atttgggtca
     1141 aagttcttga ttttcttata aagaaataaa gaaacagc
//
