LOCUS       NM_001106863            1130 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus serine protease 42 (Prss42), mRNA.
ACCESSION   NM_001106863 XM_001075965 XM_217270
VERSION     NM_001106863.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Yoneda,R., Takahashi,T., Matsui,H., Takano,N., Hasebe,Y.,
            Ogiwara,K. and Kimura,A.P.
  TITLE     Three testis-specific paralogous serine proteases play different
            roles in murine spermatogenesis and are involved in germ cell
            survival during meiosis
  JOURNAL   Biol Reprod 88 (5), 118 (2013)
   PUBMED   23536369
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Feb 14, 2008 this sequence version replaced NM_001106863.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.47797.1,
                                           SRR26360181.12561.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-226               JAXUCZ010000008.1  119651173-119651398
            227-383             JAXUCZ010000008.1  119651730-119651886
            384-646             JAXUCZ010000008.1  119652289-119652551
            647-807             JAXUCZ010000008.1  119653931-119654091
            808-1130            JAXUCZ010000008.1  119656050-119656372
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..1130
                     /gene="Prss42"
                     /gene_synonym="RGD1562548; Tessp2"
                     /note="serine protease 42"
                     /db_xref="GeneID:301027"
                     /db_xref="RGD:1562548"
     CDS             1..1023
                     /gene="Prss42"
                     /gene_synonym="RGD1562548; Tessp2"
                     /EC_number="3.4.21.-"
                     /note="testis serine protease 2; protease, serine, 42"
                     /codon_start=1
                     /product="serine protease 42 precursor"
                     /protein_id="NP_001100333.2"
                     /db_xref="GeneID:301027"
                     /db_xref="RGD:1562548"
                     /translation="MASGGGSLGFVACLLLLQPKPCEAWAAASILSTSGFPSGLSESP
                     GENSPPPTPVHTSKVASQGSTTRFPFTNFSIVCGQPLMKIMGGVDAEEGKWPWQVSLR
                     VRHMHVCGGSLLNSQWVLTAAHCIHSRVQYNVKMGDRSVYRQNTSLVIPIQNIFVHPK
                     FSTTTVVQNDIALLKLQQPVNFTSSIHPICVPTGTFHVKAGTKCWVTGWGKPDPGAPQ
                     IPTEILQEVDQSIILYEECNEMLKKMASTSVDLVKRGMVCAYKEGGKDACQGDSGGPL
                     SCEFDNRWVQIGVVSWGIGCGRKGHPGVYTDVAFYNKWLITVVNQTACLHPVVFLILL
                     LCLLTL"
     exon            1..226
                     /gene="Prss42"
                     /gene_synonym="RGD1562548; Tessp2"
                     /inference="alignment:Splign:2.1.0"
     exon            227..383
                     /gene="Prss42"
                     /gene_synonym="RGD1562548; Tessp2"
                     /inference="alignment:Splign:2.1.0"
     exon            384..646
                     /gene="Prss42"
                     /gene_synonym="RGD1562548; Tessp2"
                     /inference="alignment:Splign:2.1.0"
     exon            647..807
                     /gene="Prss42"
                     /gene_synonym="RGD1562548; Tessp2"
                     /inference="alignment:Splign:2.1.0"
     exon            808..1130
                     /gene="Prss42"
                     /gene_synonym="RGD1562548; Tessp2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggcgtccg gaggtggctc cctgggcttc gtagcctgcc tcttgctgct tcagccgaag
       61 ccctgcgagg cctgggcagc tgcctccata ctctctactt ccggtttccc ctcagggctc
      121 agtgaatctc cgggggaaaa ctcaccgcca cctaccccgg tgcacacgtc caaagtggcc
      181 tcccaggggt ctaccacccg ctttcctttc acgaactttt ccatagtgtg tggccaaccc
      241 ttgatgaaaa tcatgggagg ggtggatgcg gaagagggaa agtggccctg gcaagtgagc
      301 cttcgggtca gacacatgca cgtctgcgga ggatccctcc tcaactccca atgggtgctg
      361 actgcggctc attgcataca cagccgagtc cagtacaacg tcaagatggg cgatcggagt
      421 gtctaccggc aaaatacaag tctggtgatt cccatccaga acatctttgt ccaccctaag
      481 ttctcaacaa ctaccgttgt ccaaaatgac attgcccttc tcaagctcca acagcccgtg
      541 aatttcacct ctagcatcca tcctatttgt gtccctacgg ggacttttca tgtgaaagcg
      601 ggaaccaaat gctgggtgac aggatggggc aaaccagatc caggtgcacc acaaattccg
      661 acagaaattc tccaggaggt ggaccaaagc atcatccttt atgaggaatg taatgagatg
      721 ttgaagaaaa tggcatcgac ttctgttgat cttgtcaaga gaggcatggt ctgtgcttac
      781 aaagaaggag gaaaggatgc ttgccagggg gattctggag gcccgttgtc ctgtgaattt
      841 gataacagat gggtgcagat aggagttgtg agctggggca ttggctgtgg tcgcaaagga
      901 caccctggag tttatacaga cgttgccttc tacaacaagt ggctaatcac cgtggtgaac
      961 cagactgctt gtttgcatcc agtggtcttc ctcatcttac tgctgtgttt gctgaccttg
     1021 tgacatcctg tggacatggt gatggctcat ctcattccca tcctctctcg gagcccctct
     1081 cgactgacct tcccaatacc ctttcttcaa atcctatttg aggatccctt
//
