LOCUS       NM_001109226            2910 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus proline-rich transmembrane protein 4 (Prrt4),
            mRNA.
ACCESSION   NM_001109226 XM_001063705 XM_575414
VERSION     NM_001109226.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473959.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_575414.2, XM_001063705.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2910
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q22"
     gene            1..2910
                     /gene="Prrt4"
                     /gene_synonym="RGD1559885"
                     /note="proline-rich transmembrane protein 4"
                     /db_xref="GeneID:500059"
                     /db_xref="RGD:1559885"
     exon            1..130
                     /gene="Prrt4"
                     /gene_synonym="RGD1559885"
                     /inference="alignment:Splign:2.1.0"
     exon            131..853
                     /gene="Prrt4"
                     /gene_synonym="RGD1559885"
                     /inference="alignment:Splign:2.1.0"
     CDS             202..2910
                     /gene="Prrt4"
                     /gene_synonym="RGD1559885"
                     /codon_start=1
                     /product="proline-rich transmembrane protein 4 precursor"
                     /protein_id="NP_001102696.1"
                     /db_xref="GeneID:500059"
                     /db_xref="RGD:1559885"
                     /translation="MAGRGCLELGLFCWVLLAVPVGPQPASSVPGAPLTTLTPPPQSE
                     ASMLSLNLGLNFKFHLRGPAAVWGSPVTETHPLSPGLGQESEEDLEGDLRTDPLWELL
                     VGSPGNYVPEWGSAEGSFTPWASSLPPESTSPLSGPTKRPTAPSQPRMSTVTWATALT
                     ATAPPTSAPRPRQSELELKFDVALRAGAAPTLGHRSLPLLPSLRASLAEIAGRLGPFG
                     FFGTTLSPLRNFSSQSYQGTTAQPSFASEVSDFPGLFGTTGSLPPPLLERKFSSPSPL
                     DSVASPSSASIKTTPVQHDPTVSTSDPDELSPASFGSPSAQPGCEPGSCSEPELSDDS
                     GQPPASPLPLFFLTLEADWAEARARWGLAWEAHVYGAGALFGLVALLALLSLALLPWR
                     CPPGAPCLALLDLLLLSAGTTRAFPLFYDAYGHRDRLPALAWLLLQDLPLPCLAAGLG
                     LACLLLARPRTPRCPIGLAALLLLGLGLAAAAALGSAVHRPLRPLRLASRGLHAFLAA
                     FLSGLLLALSCWGGRRRRAGAPLGGSGFKGATPVPQVRSPFAPRESWRRAARTAPVAG
                     TFGLLSGALQGYEVLHALGYGGQTGLEGPWPWWAFQLGLRLGEVGVALPLALLGLYPA
                     LCSPRVPRRCWAKLFRLSPGHAAPLLPGGWVPGIRDKEPLGSAIARGDAELLQLCALA
                     GPGPDLLLQGGSCPGFEGARANTTQSPASSPSSDCTVDFRPPSPINLRRSIEEALCSE
                     ALLAPGLFQGPAFGDALSGLGLYRTISLGNKTGAGPSEKSEKVPGSPAPPELPSPGAW
                     PPGSSASSGSLCGLSRDSSSMLLCSSPDRPPRCPLVCVLSPPRPSESSPSLPASGSYQ
                     ALSPPSRDSPEHASELQAEEALLQEQFLDACRQIDELSMGSDTIDL"
     exon            854..958
                     /gene="Prrt4"
                     /gene_synonym="RGD1559885"
                     /inference="alignment:Splign:2.1.0"
     exon            959..1084
                     /gene="Prrt4"
                     /gene_synonym="RGD1559885"
                     /inference="alignment:Splign:2.1.0"
     exon            1085..2910
                     /gene="Prrt4"
                     /gene_synonym="RGD1559885"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccaggctgag aacgaggcac cggctctccc gcagctgatt ggcagtgctg ggtgaatgag
       61 tgcgcttggg gcaggagcag cgaggctgct gcggctcggc tctgatgtgc gcgcccgcct
      121 gccggcccgg gacccctgag ctcacaacgt gctgacaaag tgagccccct gcctgcccag
      181 gctgctgagc caggtggggc catggcaggc cgtggctgcc tggagctggg tctgttctgc
      241 tgggtcctgc ttgctgtacc tgtgggtcca cagcctgctt cctctgtacc aggtgcccct
      301 cttactactc tgaccccacc acctcagagt gaggcctcta tgctatctct caacctggga
      361 ctaaacttca aattccatct tcggggacct gctgctgtct ggggaagccc tgtcaccgag
      421 acccatcctc tctctcctgg actaggccag gagtctgagg aagatctgga aggtgatctg
      481 aggaccgatc ccctttggga actgctggtg ggttcccctg ggaactatgt cccagagtgg
      541 ggctctgccg aaggcagctt tacaccctgg gcttcctccc tgcctcctga gtctacatcc
      601 cccctctcag ggcccaccaa gaggcccact gctccctctc aacctaggat gagcactgtg
      661 acctgggcca ctgctctgac agctacagca cctccaacca gtgctcccag gcctcggcag
      721 agtgagcttg agctgaagtt cgatgtggct ttgagagcag gtgcagcccc cactctcggt
      781 catcggtcac tacccctgct gcccagcctg agggccagcc tggcagagat tgctgggcgc
      841 ttgggacctt ttgggttctt cggtactact ctgtctccac tccgcaactt ctcgagtcag
      901 agttaccaag gcacaacagc acagccaagt tttgcttctg aagtgtcaga ttttcccggg
      961 ctctttggta ccactgggtc ccttccccca ccactcctgg aaaggaagtt ctcaagccca
     1021 agcccattgg attcagtggc ttcccccagc tctgcctcaa tcaagaccac accagtgcaa
     1081 catgacccca ctgtctccac ttctgaccca gacgaactct ctccggccag cttcgggagt
     1141 ccttcagcac agcctggatg tgagccaggc tcttgtagtg agcctgagtt gtccgatgac
     1201 tcggggcagc cgcctgcctc cccgctgcct ctcttcttct tgaccctgga ggccgactgg
     1261 gcagaggcta gggctcgctg gggtctggcc tgggaggccc atgtatacgg agcaggagcg
     1321 ctcttcggcc tggtggccct gctggctctg ttgtctctgg ccctcttgcc ctggcgttgc
     1381 ccgcccggcg ccccctgcct ggcgttgctg gatctgctgc tgctgtcggc ggggaccacc
     1441 cgggccttcc cgctcttcta cgacgcctac ggtcatcgcg atcggctgcc ggccctcgcc
     1501 tggctgctgc tgcaagacct tccgctgccc tgcctagccg caggtctggg gctagcttgc
     1561 ctgctgctgg cccggccgcg cactccgagg tgccccatcg gcttggcggc gctgctgctg
     1621 ctggggttgg ggctggcggc agcggccgcc ctgggaagcg cagtgcaccg cccgctgcgg
     1681 cccctgcggc tcgcctcccg cgggctgcat gccttcctcg ctgccttcct gtcggggctc
     1741 ctactagcgc tctcctgttg gggcggccgg cggcggaggg cgggggcacc cttgggagga
     1801 tctggcttta agggtgctac ccctgtccca caagtgcgca gccccttcgc cccgcgggag
     1861 tcctggaggc gagcggcacg cacagctccg gtggccggga cctttgggct gctgagcgga
     1921 gccctacagg gctacgaggt gcttcacgcc cttggctacg gaggccaaac aggcttggag
     1981 gggccctggc cctggtgggc tttccagctt ggtctgcgtt tgggagaggt aggcgtcgcg
     2041 ctcccgttgg cgctgcttgg cctctacccc gcgctctgca gtccacgtgt gccgcggcgc
     2101 tgctgggcca agcttttccg actgtctccg ggacatgctg ccccgctgct gccaggaggt
     2161 tgggtccccg gaatccggga caaggagccc ctgggtagcg cgatcgcgcg tggggacgcg
     2221 gagctgctgc agctctgcgc cctagcaggc ccaggtcctg atctccttct ccaaggtggc
     2281 agctgcccag gcttcgaagg tgccagggcc aacacaacgc agtcaccagc ctcctcccct
     2341 agcagcgatt gcacggtgga cttccgcccg ccctcgccca tcaacctgcg gcgcagcatc
     2401 gaggaagccc tctgtagcga ggcgctgctg gctcctggcc tctttcaggg ccctgccttt
     2461 ggggacgccc tgtctgggct tggtctctac cgcaccatct cattggggaa caagacaggg
     2521 gcaggaccca gtgagaagtc cgagaaggtc cctggatccc cagcacctcc agagcttccc
     2581 tctcctgggg cctggcctcc cggcagcagc gcatcatcgg gctctctgtg tggactctca
     2641 cgggacagct catccatgct tctgtgttcc agccccgaca ggcccccgcg ctgcccgtta
     2701 gtctgcgtcc tcagtccccc gcgaccctca gaaagcagcc ccagcctccc agcctcaggg
     2761 tcctaccagg ccctatcccc accctcccgc gactccccgg aacatgcttc tgaactgcag
     2821 gctgaggagg cattgctgca agagcaattc ctggacgcct gccgacagat tgatgagctg
     2881 agcatgggca gcgacaccat agacctgtga
//
