LOCUS       NM_001109203            1878 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus proline rich and Gla domain 4 (Prrg4), mRNA.
ACCESSION   NM_001109203 XM_001079607 XM_575187
VERSION     NM_001109203.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Liu J, Liu W, Li H, Deng Q, Yang M, Li X and Liang Z.
  TITLE     Identification of key genes and pathways associated with
            cholangiocarcinoma development based on weighted gene correlation
            network analysis
  JOURNAL   PeerJ 7, e7968 (2019)
   PUBMED   31687280
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473949.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_575187.2, XM_001079607.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5756307, SAMEA5760494
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q33"
     gene            1..1878
                     /gene="Prrg4"
                     /gene_synonym="RGD1560542"
                     /note="proline rich and Gla domain 4"
                     /db_xref="GeneID:499847"
                     /db_xref="RGD:1560542"
     exon            1..297
                     /gene="Prrg4"
                     /gene_synonym="RGD1560542"
                     /inference="alignment:Splign:2.1.0"
     exon            298..418
                     /gene="Prrg4"
                     /gene_synonym="RGD1560542"
                     /inference="alignment:Splign:2.1.0"
     CDS             316..996
                     /gene="Prrg4"
                     /gene_synonym="RGD1560542"
                     /note="transmembrane gamma-carboxyglutamic acid protein 4;
                     proline rich Gla (G-carboxyglutamic acid) 4
                     (transmembrane)"
                     /codon_start=1
                     /product="transmembrane gamma-carboxyglutamic acid protein
                     4 precursor"
                     /protein_id="NP_001102673.1"
                     /db_xref="GeneID:499847"
                     /db_xref="RGD:1560542"
                     /translation="MFPLLIVLSQLPRLTLAFPLCTRSLKDSEHAPEEVFASKEAASI
                     FMHRRLLYNRFDLELFTPGDLERECYEEFCSYEEAREILGDDENTITFWQDYSVKGPT
                     TGSDVNKEKFDVMSLLTGLTVAGVFLVVFGLLGYYLCITKCNRRPYPSSSAIYTRTAR
                     HTPSIIFRSPEETVLSLSPSSEDAGLPSYEQAVALTRKHSISPPPPYPGPAKGFRVFK
                     KSMSLPSH"
     exon            419..582
                     /gene="Prrg4"
                     /gene_synonym="RGD1560542"
                     /inference="alignment:Splign:2.1.0"
     exon            583..631
                     /gene="Prrg4"
                     /gene_synonym="RGD1560542"
                     /inference="alignment:Splign:2.1.0"
     exon            632..764
                     /gene="Prrg4"
                     /gene_synonym="RGD1560542"
                     /inference="alignment:Splign:2.1.0"
     exon            765..1878
                     /gene="Prrg4"
                     /gene_synonym="RGD1560542"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagagccgca ggaggagcgc tgtcaagtgg cccgcctctc ctccttgtcc cgcagggatg
       61 ggagtggccc cagtacacaa gctgggcccg gtgcggcgca cgttcccgga gcgcccctgc
      121 gcggatccta ggcgcctcct ccgcgcgcca gtgtcgcctt ggagcctgaa agggctaggc
      181 tccgactgtc tccgagagcc agacgcgtac gcgacacagg gaccaaacca ccttggggac
      241 aagcagataa ttagactccc gcccaggggc tgctggaaca tgtgcccggg gacacagttt
      301 gacagttgct agactatgtt tccacttctg atcgtactca gccagctgcc cagacttacc
      361 ctcgcatttc ctctttgtac cagaagccta aaggattcag aacatgcccc agaagaagtc
      421 tttgcatcaa aagaagcagc gagcatcttc atgcaccgcc gtctcctgta caataggttt
      481 gatttagaac tcttcactcc tggggacctg gagagagagt gctatgagga gttttgcagt
      541 tatgaagaag ccagagagat tttgggggat gatgaaaata cgatcacatt ttggcaggat
      601 tattcagtta aagggccaac cacaggatca gatgttaaca aagagaaatt cgatgttatg
      661 agccttctga ctgggttgac tgtcgctggc gtgttcctag ttgttttcgg cttacttggc
      721 tactatctat gtatcaccaa gtgtaacagg cggccatatc cgagttcttc agccatctac
      781 acaagaacag ccagacacac gccctccatc attttcagaa gccctgagga aactgtcttg
      841 tctctgtcgc catcttcaga ggatgcaggg ctaccttcct atgaacaggc agtggcactg
      901 accagaaagc acagcatctc gccaccacct ccctatcctg ggcctgcaaa aggatttagg
      961 gtatttaaaa agtctatgtc actcccatct cactaatcct acctggctgc ctcgctggaa
     1021 gacattcgtt catatggttg aataatttat tctccctgaa gtaaaaaagg tctgcttgtt
     1081 cagcttttta tgacgcacgg aaaggaatta aggaatgata cacagagcag aattcaccac
     1141 agctctgctt tcgtctcgga cctgaactgg attgctggca tcttggtaag aaacttcatc
     1201 tccattacct tgaagttaag aagaaagtgc cttttgcagc atatactact gtactggttc
     1261 aaaacccttt gctgtagttg gataatgtgg tatgagccta caaacactca ggaggcttag
     1321 agagatgaga gctcaccctg tctcaaaaca cagtttgcta ttggtagaat aattagaatt
     1381 agccaaaagg aactgtcagt cttagatcat gagattggtc ttctcttcct taggatttct
     1441 tttttgactg aaaataatca tacaatttga tgcttgctgt aaatctgttc taattagtgc
     1501 agagcattca tcaaatttgc aggtcttatt tttcactatc aatcacagtt ccatggagtc
     1561 aagaggtttc gtttgttttt gtttttttta aaaaaaatag tattcatggg ctaagaagat
     1621 gcctcacttg gaaagtgctt gtcatgcaaa tatgaggacc tgagttcaat cctcaatact
     1681 cgttcatgtt tgaagcaaac aaacaacaac aacaaacaaa agaagcaaac aaacaaacaa
     1741 attggagtcc ttgggtgcac acctgaaatc tcggcactgt aggaggggac tcaggagaac
     1801 ctctggggct ggtggctagc cacacgagct gaatcaggaa cctccaagtt cagtgaaaga
     1861 ctctgtctca aaaattag
//
