LOCUS       NM_001191888            1310 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus proline rich and Gla domain 1 (Prrg1), mRNA.
ACCESSION   NM_001191888 XM_343791
VERSION     NM_001191888.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            [WARNING] On Oct 24, 2024 this sequence was replaced by
            NM_001191888.2.
            
            On Jul 17, 2010 this sequence version replaced XM_343791.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB763919.1, CB798185.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676788 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-79                JAXUCZ010000021.1  46493529-46493607   c
            80-131              JAXUCZ010000021.1  46437164-46437215   c
            132-204             JAXUCZ010000021.1  46415899-46415971   c
            205-365             JAXUCZ010000021.1  46400052-46400212   c
            366-1310            JAXUCZ010000021.1  46383958-46384902   c
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq21"
     gene            1..1310
                     /gene="Prrg1"
                     /gene_synonym="RGD1561320"
                     /note="proline rich and Gla domain 1"
                     /db_xref="GeneID:363472"
                     /db_xref="RGD:1561320"
     exon            1..79
                     /gene="Prrg1"
                     /gene_synonym="RGD1561320"
                     /inference="alignment:Splign:2.1.0"
     exon            80..131
                     /gene="Prrg1"
                     /gene_synonym="RGD1561320"
                     /inference="alignment:Splign:2.1.0"
     exon            132..204
                     /gene="Prrg1"
                     /gene_synonym="RGD1561320"
                     /inference="alignment:Splign:2.1.0"
     CDS             198..851
                     /gene="Prrg1"
                     /gene_synonym="RGD1561320"
                     /note="proline rich Gla (G-carboxyglutamic acid) 1"
                     /codon_start=1
                     /product="transmembrane gamma-carboxyglutamic acid protein
                     1"
                     /protein_id="NP_001178817.1"
                     /db_xref="GeneID:363472"
                     /db_xref="RGD:1561320"
                     /translation="MHVFLTGEKANSVLKRYPRANGLFEEIRQGNIERECREEVCTYE
                     EAREAFENHEKTKEFWSTYTKAQQGETNRGSDWFQFYLTFPLIFGLFIILLVIFLIWR
                     CFLRNKTRRQTVTESHIPFPQHLNIITPPPPPDEVFDSSGLSPGFLEYVVGRSDSVST
                     RLSNCDPPPTYEEATGQVNLRRSETEPHLDPPPEYEDIVNSSSASAIAMVPVVTTIK"
     exon            205..365
                     /gene="Prrg1"
                     /gene_synonym="RGD1561320"
                     /inference="alignment:Splign:2.1.0"
     exon            366..1310
                     /gene="Prrg1"
                     /gene_synonym="RGD1561320"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcctggctc ggcagttgcg ggagcgcgca ggcgcggctt gcagctctgc ttgcgagaag
       61 tagcggagca gggctaacga gaatcgtcat tcaagacctg tcagaagcca caagaaaaaa
      121 aatgggaaga gaatgctggg atcaaagatg cactccatcc accctgctga ttagatttag
      181 tttgactgaa gagaaagatg catgttttcc tcacgggaga aaaagcaaac tcagtcctaa
      241 aacgctaccc aagagcaaat gggctttttg aagaaataag acagggcaac atcgagcgtg
      301 agtgcagaga agaagtctgc acatatgaag aagccagaga ggcttttgaa aatcatgaaa
      361 aaaccaagga gttttggagc acctacacaa aagcacaaca aggagaaacc aacagaggaa
      421 gtgactggtt tcaattttat cttacttttc cactaatctt tggcctcttc attattctcc
      481 ttgtcatttt cttaatctgg agatgctttc taagaaacaa aactcggaga cagacagtga
      541 ctgaaagcca cattcctttc cctcaacatc ttaacatcat tactccacct cctccaccag
      601 atgaagtctt tgatagcagt ggattgtctc cagggttttt ggaatatgtt gttgggcgct
      661 cagattcagt ttccactcgc ctttccaact gtgatccccc accgacatac gaggaagcca
      721 ctggccaggt gaatctgaga aggagtgaaa cagaacctca tttagaccca ccaccagaat
      781 atgaggatat agtcaactcc agttcagcca gtgccatcgc tatggtgcct gtggtcacca
      841 ccatcaaatg aagctgtaaa tctttttttt ttactttaat catttctaaa atactaatgg
      901 aaaaactttc tagcacttta atactacaga aatgtgcatt gacttatttt attagactct
      961 tagagcatac cacttcacat ttactggttt gatttatctt tggttttgtt tgttattata
     1021 aaattattaa ctgtgtttgt ttttttacaa gaggaaacat gaatgaaaga catatcagtg
     1081 gcagtcttta tgtgccgtaa ggaatacaca tgtatgcata tagccacata tataccatct
     1141 aatttatgta caactaactt ctactacacc accaataaaa acagcattac tcacaaaaat
     1201 taaaaagtca gggggcacaa acagtgtatg tgatagacag caacatgcat gttttctaat
     1261 taaagacatt ggttaacctc ctatttctct ttcatgaaag gaaaaatatg
//
