LOCUS       XM_001064406            2199 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus proline rich 33 (Prr33), transcript
            variant X1, mRNA.
ACCESSION   XM_001064406
VERSION     XM_001064406.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001064406.8.
            
            On Jan 21, 2021 this sequence version replaced XM_001064406.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2199
                     /gene="Prr33"
                     /note="proline rich 33; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 ESTs, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 8 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:685580"
                     /db_xref="RGD:1592568"
     CDS             163..1482
                     /gene="Prr33"
                     /codon_start=1
                     /product="proline-rich protein 33"
                     /protein_id="XP_001064406.1"
                     /db_xref="GeneID:685580"
                     /db_xref="RGD:1592568"
                     /translation="MLISVVSIPPAAGGPRPEPSPGPPPPLLPKPGKDNQRLQKLLRK
                     AARKKMVGTVPTPPGAFRTSLSPVSEASHDLETPVLCPAEAPHTVAPLPRSPHTPIIH
                     HVASPLQKSTFSFSLPQQRSLATHFKASPNLEAPAPETACPRGGFAHVSAPTVGGTHI
                     TQVHIRLSPSSHIGTSESPRMALDGDKSLCTSGTQSLIPVAHIRPLPTGVQSVSPGPE
                     EPPITRPPSSFQASINRESGARVVVPIAPTYRSPGPSPYSPASAAPETKYPEELPTAR
                     PAMEPNHVSSLPGASGPSGPQPRPAPKVAPKPSLSGWTRLKKQLMEDAKEPAFPEPEL
                     NLESTQPEVPAPMGPQPPVSRASRMWDAVLYRMSLSESHRGQPVGSGDRGHPPTCLSR
                     LPFLCRPRFNARKLQEVVRPPPTFHPILELHSQPKNFNRTAAGWRLQ"
ORIGIN      
        1 tcagtgaggt cagagagacc gggcaggtct tattttgagt aacagtcacc tcctcctcag
       61 gggaacaggc ccaaggtaca gcgggacagc agagtgggca ctgctggatc agctgttgcc
      121 ggccaccaaa gacttgagca ggtaacacat gcaagatcag ggatgctcat ttcggttgtg
      181 tcgatacccc cggcagcagg tggcccaaga cctgagccct cccctgggcc cccgccaccc
      241 ttgctgccta aaccaggaaa ggacaaccag cgacttcaga agctactgag aaaagctgct
      301 cggaagaaga tggtgggcac ggtccccacc ccacctggag ccttccgtac ctccctgtcc
      361 cctgtgagtg aggccagtca tgacctggag accccagtcc tgtgtcctgc tgaagcccct
      421 cacacagtgg cccctttacc ccgctctcca cacaccccca ttattcatca cgtggcatca
      481 cccctgcaga aatccacttt ctctttcagc cttccccagc aaaggtctct ggccactcac
      541 ttcaaggcat ctcccaatct tgaagcgcca gccccagaaa ctgcctgccc ccgcggtggc
      601 tttgcccatg tatctgcccc tacagtaggt ggcacccaca tcactcaagt gcacatccgg
      661 ctgtcaccat cctcacatat tgggacttct gagtccccca gaatggccct ggatggtgat
      721 aaaagcctgt gtacttctgg aacccagtct ctcattccag tggctcatat tcgtccactg
      781 cccactgggg tacagtcagt cagtcctggg cccgaggagc cccctataac aaggccacca
      841 tctagctttc aggcctcaat aaacagagaa agtggtgcta gggtggtggt gcccatagcc
      901 cctacatacc gctcacctgg accctcacct tatagcccag cttctgcagc tcctgaaaca
      961 aaatatccag aggagctgcc cacagccagg cctgccatgg agcccaatca tgtctctagc
     1021 ctcccgggag cctcgggccc ctcaggcccc caaccacgcc ctgctcccaa agttgcacct
     1081 aagccctccc ttagtggctg gacacgtcta aagaagcagc tgatggagga tgcaaaggag
     1141 cctgcttttc cagagccgga gctgaacctg gagtcaacac aaccagaggt gccagccccc
     1201 atgggcccac agccccccgt gtcccgagcc tccaggatgt gggatgcagt gctgtaccgc
     1261 atgtcactgt ctgagtccca tagaggccag cctgtagggt ctggagatag gggccaccct
     1321 ccgacctgcc tcagccgcct gcctttcttg tgccgacctc gtttcaatgc ccggaagcta
     1381 caggaggtgg tccggccccc tcctaccttc cacccaattc tggagctgca ttcccagccc
     1441 aagaatttca accggactgc tgcaggttgg aggctccagt gatgaagagt ggcctctggg
     1501 actctggact gtggtagaca gaaactggct gaggatgtgc atacagagaa gagagccttg
     1561 gccctcacaa gtgaacagga tgggtcagca gggtgcatga ccatggtagc tgggtgctag
     1621 ctgctaaggg gaggagcctg ttggacagac acagatcagt tggtgggaac tgatatggca
     1681 agtgagagaa gtgactgaag ctgggaacat gtggctgggg gtggcttggg gttgggagaa
     1741 tgtagactgg agaatgttcg tggatggtgg gtgcctaaat tcaggtctag ggtcttgtca
     1801 gtgcaaaggg gcttggataa gggggtattg agaggtacat agaactgggc aatggaggaa
     1861 ggattttcta tggttccatg aatgtccctt ctgatttcct gacagcaagg gcttactgaa
     1921 tgcgtggtgt agtgaaaaat cagccaattt taacagttgg gtaagggtag gtcaagctag
     1981 agggctacag aggcaggggc caggcataga ggaaccccta agatctgcca gactctcatc
     2041 agctgtgaga ggagggatcc acaggggcca ggagtggctt cccattacag ccaccaggat
     2101 tcagccaggg tcgagctggc agccccaccc aggatgtgat tacccagggt attacggttg
     2161 tggatggagc caccaataaa tgtatgtacg ctacacaga
//
