LOCUS       NM_001173428            1291 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus proline rich 19 (Prr19), mRNA.
ACCESSION   NM_001173428 XM_001061619 XM_002725548 XM_006228478
VERSION     NM_001173428.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On or before Oct 25, 2021 this sequence version replaced
            XM_006228478.4, NM_001173428.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.1990.1,
                                           SRR26360181.2655590.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-114               JAXUCZ010000001.1  90014971-90015084
            115-739             JAXUCZ010000001.1  90016723-90017347
            740-1291            JAXUCZ010000001.1  90017437-90017988
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..1291
                     /gene="Prr19"
                     /note="proline rich 19"
                     /db_xref="GeneID:681408"
                     /db_xref="RGD:1595416"
     exon            1..114
                     /gene="Prr19"
                     /inference="alignment:Splign:2.1.0"
     exon            115..739
                     /gene="Prr19"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..1215
                     /gene="Prr19"
                     /codon_start=1
                     /product="proline-rich protein 19"
                     /protein_id="NP_001166899.1"
                     /db_xref="GeneID:681408"
                     /db_xref="RGD:1595416"
                     /translation="MDPRGPAPQPFQQLEKPGRIRRRKTRRERNKALVSSHRPLARQD
                     PPISSRDPCVIFQEPATSTAPKLVVITQGRLSREHRGLFNHEVKSLDVARLLNRGSLE
                     SCTPLLPTKSSCSPVRVQEPDLQSKGKENKVPGGSGPGPPNSPDLPVLGQLLEELQCQ
                     LVVPQAFPRRNLVQEARDTIIRTLQGCHGCVPDLALVLRGCQLPLPEAKRRAPERQRM
                     APSCINAPEHAPREGRQRTQQATKGCNFALPHTCSSITPAHRVSQVQPPDRQLPFLSS
                     ASSPSGAAWGPPTAFDMLKSIWLIATPPPPQPWDVCPPQPLPQPSLPLLPRTSALDWS
                     PNPPAPLPSLSWVVTQSSPEAWSFPPMRLY"
     exon            740..1291
                     /gene="Prr19"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcgaggcccg gaagtgcgcg aacagcttcg aggcttgggt ctctacagga aagaagccac
       61 cgctctccac agccacgtgg agtccagggc gggggtccgt taggagagaa gagggatatc
      121 atggaccctc ggggtccagc ccctcagcct ttccagcagc ttgagaaacc tggtcgaatt
      181 cgccgtcgca agaccaggag ggagcgaaat aaggccctgg tgagcagcca caggccattg
      241 gcccgtcagg atcctcccat atccagccgg gatccatgtg tgatcttcca ggaacctgca
      301 acctccacag cccccaagct cgttgtgata actcagggca ggttgagccg ggagcacagg
      361 ggtctcttca accatgaggt gaagtccctg gatgtggccc ggctgcttaa caggggctcc
      421 ttggaatcat gtacccctct gctaccaacc aagtcctcct gcagcccagt cagagttcaa
      481 gaaccagacc ttcagtcaaa aggcaaggag aacaaggtac caggaggctc aggcccaggc
      541 ccaccaaatt ccccagatct ccctgtgttg gggcaactgc tggaggagct gcagtgccag
      601 ctggttgtgc cacaagcctt ccccaggagg aacctagtgc aggaggccag agataccatc
      661 ataagaacct tacagggctg ccatggctgt gtgcctgatc ttgccctggt gctccgaggt
      721 tgccagctac ccttgcctga agccaagcgg agggcccctg agagacagag gatggcacct
      781 tcttgtatca acgctcctga gcatgctcca cgggagggga ggcaaaggac tcagcaggca
      841 acaaaggggt gcaactttgc cctgccgcac acttgcagca gcatcacccc tgcacacagg
      901 gtcagccagg tgcagcctcc agatcgacaa ctgccattcc tgtcctcagc atcttcacca
      961 tctggagcag cttggggtcc tccaacagct tttgatatgc tgaaaagcat ctggctcata
     1021 gccacaccac cccctcccca gccctgggat gtctgcccac ctcagcccct acctcagcca
     1081 tccttaccct tgttacccag aacatctgcc ttggactgga gccccaatcc tcctgcccca
     1141 ctgcccagtc tctcctgggt ggtgactcag agcagtccag aggcttggtc cttcccccca
     1201 atgagactgt actgaggaga ttaggtaggg ctgggggcag gtatcccaca ctcccagtca
     1261 cctcaataaa acaccttctt ggtcctcttg a
//
