LOCUS       NM_001008379             785 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus proline rich 13 (Prr13), mRNA.
ACCESSION   NM_001008379 XM_343337
VERSION     NM_001008379.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 785)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 785)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 785)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC086446.1.
            
            On Dec 16, 2004 this sequence version replaced XM_343337.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086446.1, FQ234745.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..785
                     /gene="Prr13"
                     /gene_synonym="RGD1307129"
                     /note="proline rich 13"
                     /db_xref="GeneID:363004"
                     /db_xref="RGD:1307129"
     exon            1..65
                     /gene="Prr13"
                     /gene_synonym="RGD1307129"
                     /inference="alignment:Splign:2.1.0"
     exon            66..104
                     /gene="Prr13"
                     /gene_synonym="RGD1307129"
                     /inference="alignment:Splign:2.1.0"
     CDS             86..505
                     /gene="Prr13"
                     /gene_synonym="RGD1307129"
                     /codon_start=1
                     /product="proline-rich protein 13"
                     /protein_id="NP_001008380.1"
                     /db_xref="GeneID:363004"
                     /db_xref="RGD:1307129"
                     /translation="MWNPSAGPNPYPPQVVCPGGSNPACPPSQNPAFPPGPCPPGIPQ
                     GNPAFPPCRPPYPVPQPGCPGYQPSGPYPPPYPPAAPGMCPVNPPAPGMVGPGIVIDK
                     KTRKKMKKAHKKSHKHHKHGKHSSSSSSSSSSSSDSD"
     exon            105..454
                     /gene="Prr13"
                     /gene_synonym="RGD1307129"
                     /inference="alignment:Splign:2.1.0"
     exon            455..775
                     /gene="Prr13"
                     /gene_synonym="RGD1307129"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaccaggaag tgtgtgatcc cagactggga aggaggacgg gaagaggacc agcgatcttg
       61 ggaaggattg aactaacttg tggacatgtg gaatcctagt gctgggccaa atccatatcc
      121 accccaagtt gtgtgtccag gaggttccaa tcctgcctgc ccaccatccc aaaatcctgc
      181 ctttcctcct ggcccctgtc ctcccggaat tcctcaggga aacccagctt tccctccgtg
      241 tcgacctcct tatcctgtac cgcaaccagg gtgtccagga taccaaccct caggtcccta
      301 ccctcccccg tacccaccag ctgctcctgg catgtgcccc gtgaatcctc cggctcctgg
      361 catggtaggc ccaggaatag tgatagacaa gaagactagg aagaaaatga agaaagctca
      421 caagaaatca cacaagcatc ataagcacgg gaagcactcc tcctcctctt cctcctcctc
      481 ctcctccagc agtgactctg actgaacaca gggcctggag cctcctcccc tcaagcctca
      541 ccagctccag tctcccacca agcttcacct gtcatcttgt actgagggga aattagcgcc
      601 ccgccccact ccttcctgtg ccttctcccc gctgttgggg aagatgactg ccgaggggta
      661 gcaaaagcta ccttctccct gcttgatatt accgtagctt atgaggtggg ggggggcact
      721 gtcttttaag atatgcacca tgtgattttt cttttgtaac ttgggtttgt gacaaaaaaa
      781 aaaaa
//
