LOCUS       XM_006256829            3662 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus phosphoribosyl pyrophosphate
            synthetase 2 (Prps2), transcript variant X1, mRNA.
ACCESSION   XM_006256829
VERSION     XM_006256829.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006256829.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006256829.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3662
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3662
                     /gene="Prps2"
                     /note="phosphoribosyl pyrophosphate synthetase 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 mRNAs, 28 ESTs, 2 long SRA reads, 7 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 127 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:24689"
                     /db_xref="RGD:3415"
     CDS             190..1155
                     /gene="Prps2"
                     /codon_start=1
                     /product="ribose-phosphate pyrophosphokinase 2 isoform X1"
                     /protein_id="XP_006256891.1"
                     /db_xref="GeneID:24689"
                     /db_xref="RGD:3415"
                     /translation="MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEI
                     GESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK
                     VGESRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRE
                     NITEWRNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRV
                     AILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTN
                     TIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL"
ORIGIN      
        1 tagatcctgc tgccgcgttt tcccgcttca ccagcagcgg cggccaccgc agcagcagca
       61 gcagcagcag cagcagcagc agcagcagca gcagcagcgg cggcggcaac tgcagcagcc
      121 accgtagcag cagtctgcgt cgcggtcgct ttctccttct ctggcgcgct tcagtccccg
      181 tgagtcacca tgcccaacat cgtgctcttc agcggcagct ctcaccagga cctgtcgcag
      241 cgcgtggccg atcgcctggg cctggagctg ggcaaggtgg tcaccaagaa gtttagcaac
      301 caggagacca gtgtcgagat tggtgaaagt gtgcgagggg aagatgtcta tatcatccag
      361 agcggctgtg gggaaattaa tgacaacttg atggagctac tcatcatgat caacgcgtgc
      421 aagattgcat cctcatccag ggtaacagct gtgataccct gcttccccta cgcccggcaa
      481 gataaaaagg acaaggtagg cgagagtcgt gctccaattt ctgctaagct tgtggccaat
      541 atgttgtcag ttgctggggc tgatcacatc attaccatgg acctgcatgc ctctcagatc
      601 cagggcttct ttgatattcc tgtggataat ttatatgcag aacctgcagt tcttcagtgg
      661 attcgggaga acatcactga atggagaaac tgtattattg tttctccaga tgctggagga
      721 gccaaaaggg ttacgtcaat tgcagacaga ctgaatgtgg aatttgcttt gattcacaaa
      781 gagagaaaga aagcaaatga agtggaccgg atggttcttg tgggcgatgt gaaggaccgt
      841 gtggctatcc tggtggacga catggctgac acatgtggta ccatctgtca tgctgcagat
      901 aagttactct cagctggtgc caccaaagtt tatgctattc ttacccatgg aatcttctct
      961 gggccagcta tttccagaat aaataatgct gcctttgaag cagttgttgt caccaatacc
     1021 attccacaag aggacaaaat gaaacactgt tccaaaattc aggtgatcga catttcaatg
     1081 attctggctg aagccattcg aagaacccac aatggggaat ccgtgtccta tctgttcagc
     1141 catgtcccgc tgtagtctgg attggaatat tgaaggggga gcaagcctcc tccaacttct
     1201 cactgtcttt gtctgcctgc tgttttagca ttaggactca gcaattctag gatgatcact
     1261 ggcaaaagcg tctgatctat gtacactctg agggtcctct gtctcctcaa gggcaagact
     1321 actacttagc agttctgggg gagggcagag gaaggtgctg gttatttggt ctttaaatga
     1381 agtgatgtca atgagaaaat agtcttttcc ctcattcttt tttagtactt tgaggcaaca
     1441 acttttaagc ctaaaatccc attgtggaaa tttgtcatac atatattttg aggttgccaa
     1501 aggtgacttc aaatgaaagc cttctgtgta aatatataat aaggcctgtg gctatttggg
     1561 gaaaatccta aatagccttt atttcagaga gaaccttgga aaatttatac tatcatgaat
     1621 tttgaaattt ttttaataat aacggtttat ttttttgtcc tttatcagga ctgaatttta
     1681 ttgagtctaa gctagtcatt gacatactga ctttccttag tagatattag acatattgaa
     1741 gacaatataa ggctgtacca tttttaatca ccactttgaa gatatgtcat aactgtcaac
     1801 ttaactaaaa ctcccagatt atgatcagtg atcactgtga tttggatacc atttcaggat
     1861 gtagcaatga ttttgtggcc acctagatgt acaactttgt gtatcccagg ggaattactc
     1921 tttaggatga cgctcacgtc catgcatttt tccctaataa tttcttcttg tagatgtctt
     1981 ccaaaagaga gactccttga aatcccctta cattttttgg ctgattagta ttttttttca
     2041 catacataaa atagtgaagt gtcgaatgcc atcaaatgta tttattcaaa aattgcataa
     2101 ttatgcttga gttaaatgtt cttcggccct atgtcatcgg aagtcctaaa tttctaatga
     2161 ctagttatct ctaaagctgc taaaatgtag ataggagatg gctacaaaac agtggctaca
     2221 aaagtgaatg tctgatccat taaaataaac ttcaaagaaa tggctcggaa agcttaggga
     2281 agaagaatct cattatggat ggtattcttt ataaaacaat cttttagtga agtgtggagg
     2341 tctgtgcgga ccacatgttt aaggccagcc tgggctatac agtgagttcc aacttagctt
     2401 gggctgcaga attagactgt gtgtcataaa accaaatgaa acaacaaagg cagttctcta
     2461 tgtcatcatt aaaagtggac aacctatcat tttccttctc accaagaaga ggatttgcct
     2521 gtgtacctaa agcttaggaa tgctaacaaa aaaaaaaaaa aaatcccacc cccgcccctt
     2581 gctgagtatt ataggtaaat tctcagccct aaattctgca ggtagaaaaa tcctatccat
     2641 ctgagtagca tactcaacca gcgccctgga acatcagctg tcagaggagc agaattcaaa
     2701 tcagtgttac aaagtataat ttatgttatt atagaaactg gcattttgac tataccttac
     2761 ttgtaaccat tctgaagaaa gtggtccact tcacctggga agctcagctc tgtggtacag
     2821 tctgactgta aagccttggc taagacgtgt gtcaagacct gtttgatact atgcaactgt
     2881 tacttttgat aaatgtatga tgaatgtatt tcttgggttt tatggctatg ctgcaaacat
     2941 ccttgtgcat acccacatgg agatagctct gtgtgtgtgt ctgtgtacac atgtcccaaa
     3001 gtgttggcat gacaaaagcc agttggtaat cattttgttt aagatattta aagcttaatg
     3061 tgtacagtgg atcttaaaat aataatgttc agatttaaaa ccctgctaga aaaaaaaaat
     3121 ctatctggct cttctatgaa attgagagct catggtttct gcccttactt ggcctgagtt
     3181 agtattttaa agtacctctg aatacatttg tgaactaatt agcctggact gagccttatt
     3241 tagtggaaat acagttttaa atattgatgg tttcagtttg gctaaaatga cgaaggctgc
     3301 ctcgtgagca gccttaattc agaactttct tgtttcttgc tgcttgtggt aaagaaatat
     3361 aatggaaacc accaaataga tcagctctgt ccaactatgg aaggagaatg ttagggatgt
     3421 ctagccagaa aggggagcca ggaaaatgaa tatgccaaag ttgtttagcc tccacctaaa
     3481 ttttattagt caactgatag atgttcatat gctaactttc ctttgttcga tacaatgtcg
     3541 actaaattca gggatatatt ccttgcagtg cttgccctgg ttttagagac tagagaattt
     3601 taagatccca tgccgtttac taagacattt caataaaatt gtgctgactt ccttgtttca
     3661 ta
//
