LOCUS       XM_039111975             906 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus protein only RNase P catalytic subunit
            (Prorp), transcript variant X1, mRNA.
ACCESSION   XM_039111975
VERSION     XM_039111975.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111975.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..906
                     /gene="Prorp"
                     /gene_synonym="Mrpp3; RGD1305089"
                     /note="protein only RNase P catalytic subunit; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 2 long SRA reads, 1 Protein, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 43 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:299050"
                     /db_xref="RGD:1305089"
     CDS             197..844
                     /gene="Prorp"
                     /gene_synonym="Mrpp3; RGD1305089"
                     /codon_start=1
                     /product="mitochondrial ribonuclease P catalytic subunit
                     isoform X1"
                     /protein_id="XP_038967903.1"
                     /db_xref="GeneID:299050"
                     /db_xref="RGD:1305089"
                     /translation="MRDVIDGGDQYKKTTPQELKRFERFVKSCPPFDIVIDGLNVAKM
                     FPKGRESQNLLGIVSQLAQQNLQLLVLGRKHMLRPSSQWRKDEMEQVRKQAHCFFADN
                     ISEDDPFLLYATLNSGSHCKFITKDLLRDHKACLPDARAQRLFFKWQQGHQLAITKGF
                     LKSKLTFQHILSYDTVVQTTGDTWHIPYDEDLVPRSSCEVPTKWLCLQRKTPAPC"
ORIGIN      
        1 tgcccaggag ctggtgtgga actggaagga tttaacaaga ctggcaagca agtgtgaagg
       61 accaagcatt cctggaagac aatggaaagg acagttcacc acaattcaga aaagtggcca
      121 gtgttcaagc tgtggcagag ccatagagtc tatccatctg agtccagaag agtatgaatt
      181 tctcaaggaa acaatcatga gagatgtgat tgatggtggc gaccagtaca agaagacgac
      241 acctcaggaa ctgaagagat ttgagcgctt tgtgaagtcc tgtcctcctt ttgatattgt
      301 tattgatggc ctcaatgttg caaaaatgtt tcctaagggt cgtgaatctc aaaatctcct
      361 gggtatagtt tctcaactgg cccagcagaa tctacagctg ctggtcctgg gccggaagca
      421 catgctgagg cccagttccc agtggagaaa ggacgagatg gagcaggtgc ggaagcaagc
      481 ccactgtttt tttgctgata acatctcgga ggacgatcct ttccttctgt atgccacact
      541 gaactcaggc agtcactgca agtttatcac caaagacctg ttgcgggacc acaaggcctg
      601 cctgcctgat gcccgggctc agcgcctgtt ctttaagtgg cagcagggcc atcagctggc
      661 aatcacgaaa gggtttctga aatcaaaact aaccttccag catattctca gctatgacac
      721 tgtggtgcag acgactggag acacctggca cattccttat gatgaagacc tggtgccgag
      781 atcctcctgt gaagtgccca ccaaatggct gtgcctccag agaaagaccc ctgccccctg
      841 ctgagtcgta ctggcctggc ttcctggcat gacctgtgtt ctggaaataa aaggatttta
      901 gtaaca
//
