LOCUS       NM_001400816            4845 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus proline-rich basic protein 1 (Prob1), mRNA.
ACCESSION   NM_001400816 XM_001069975
VERSION     NM_001400816.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4845)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000018.1.
            
            On Jan 27, 2022 this sequence version replaced XM_001069975.6.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4845              JAXUCZ010000018.1  27516599-27521443   c
FEATURES             Location/Qualifiers
     source          1..4845
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p11"
     gene            1..4845
                     /gene="Prob1"
                     /note="proline-rich basic protein 1"
                     /db_xref="GeneID:689207"
                     /db_xref="RGD:1594845"
     exon            1..4845
                     /gene="Prob1"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..3076
                     /gene="Prob1"
                     /codon_start=1
                     /product="proline-rich basic protein 1"
                     /protein_id="NP_001387745.1"
                     /db_xref="GeneID:689207"
                     /db_xref="RGD:1594845"
                     /translation="MLTALAPLALPGLSRRLPASAGRQDSSGSSGSYHTAPGSPEPPD
                     VGPDTEGQGTWLWVASGRGAGAQPVLSVSAQNSRQQHCSGSGFPRGPGSGPPLPQPQL
                     RMLPSGEMEVIFGAGPLFSRSDAEDLEEQQLVAPTFSSPLLPGPASPVSVSSQPQVPD
                     GGSRWATYLELPPREPSPAVSGQYECVEVALEERTAPVRPRTVPKRQIELRPRPRSPS
                     QDSRAPRPRLLLRTGSLDESLSRLQAAAGIVQTALARKLGSAVPAPSNVTLKSTGKRE
                     STTNSQETAASTHVVLEEAKSRPPRAHDHSASAKAPRPWPSLRERAIRRDKPPPGTEP
                     LGPVSSSIFLQSEEKIHQAHKQEPKTQFPRETPDRTVPRARSPPSRGSRVVPSRVVRP
                     RSPSPPLQAPNGAVRGPRCPSPQNLPQPHKIVWRTSSPAFPGASSAWEDRNASVEEVV
                     SRRTPSPPPLSQWTQGVARVGNPCPEAPLLWKVPNSRGGDAAGLSRDPSLPALLPRES
                     PHPIETRSPSPGETWSPIAQASSTALRQEALNGLTQKLESPTPSAPGTPELPEAQCLL
                     SLENANIAFRDGQPSPDVDTTEQPRSHLTSILDDDVCPETLGSGEATSGRPRVTIPRP
                     RDVRKMVKTTYAPSFPAGTPGSGLPAPPADTCGEEGDVSKTQKLPALESPAPAHYTSI
                     FLKDFLPVVPHPYETPEPSLPATPKDASQSSGVPRRRAENSTAKPFARSEIRLPGALA
                     FGQRREKTPSVQRPGPGGENPDAEAQSLVPDREGPTSPLGGARTSTQRSPLESTGTRP
                     PRPGSPQAGPNSSLRAAPELETPLVSPATAVQAPLLPDPPATAARTAAPFPRAASAPP
                     TDRLHPASSLGMRRPPGAVPAGKVLVDPESGRYYFVEAPRQPRLRLLFDPESGQYVEV
                     LLPPSPSPSRPPRQPYAPLALGPGLYPPVYGPISGPSLSPLSHNLPALGGLQLPWAPE
                     AGSLEGMYYMPLSGTPSPAPPPLAFCGPPPSSGPIQSSKGSVFPL"
ORIGIN      
        1 agtgctaggt gtcctgccca ccatgctgac tgcgctcgcc ccgctagccc ttcctgggct
       61 ctcaaggcgg ctgcctgcct ctgcggggcg tcaggactcg tccggttcgt ccggctccta
      121 ccacacagct ccgggttctc cggagccccc ggacgttggg ccggacacag aaggccaggg
      181 gacttggctc tgggtggctt ctgggcgggg ggcgggcgcg cagcctgtcc tgtctgtcag
      241 cgcccagaat agccgccagc agcactgctc cggctcgggt ttcccgcgag gcccgggctc
      301 cggcccgccg ctgccccagc cccagctgcg catgctgccg tcgggggaga tggaagtcat
      361 cttcggcgcg gggcctctgt tcagccgctc cgacgcggag gatctggagg agcaacagct
      421 cgtggcgcct accttcagca gtcccctgct gcctgggcca gcgtctccgg tctctgtgtc
      481 gtcgcagccg caagtccccg acgggggctc tcgctgggcc acctacctgg agctgccgcc
      541 ccgcgagccg agtcctgccg tctcaggcca gtacgaatgt gtggaggtgg ccctggagga
      601 gcgcaccgcg cccgttagac cccgcacggt accgaaacgt cagatcgagt tgcgtccgcg
      661 gcctcggagt ccctcgcagg acagtcgcgc gccgcgtccc cgactgctcc tgcgcaccgg
      721 ctccctggac gagtctctga gccgcttgca ggccgccgcg ggcatcgtgc agacggcgct
      781 ggccagaaaa ctaggctctg cggtcccagc ccccagcaac gtcactttga agtctacggg
      841 caagcgagaa tccacgacga actctcagga aacggcagcc agcactcatg tggtcctgga
      901 agaggccaag tcccggccac cccgcgcaca cgatcattct gcctcggcca aagccccacg
      961 gccttggcct agcctccgag agcgagcgat tcggcgggac aagccgccac ccgggaccga
     1021 gcctctgggt ccagttagtt ccagcatctt tctgcagtca gaggagaaaa ttcaccaggc
     1081 tcacaaacag gaacccaaga cccagttccc ccgtgagact cccgatcgaa ccgtgccgag
     1141 ggcacggagt cctccttcca gaggttcccg ggtggttccc agtagggttg tgagaccgag
     1201 aagcccatct cctccgctgc aggctccaaa cggggccgtg cggggtcctc gctgcccgtc
     1261 tccccagaac ctcccacaac ctcataagat tgtttggaga acgagtagcc cggctttccc
     1321 tggcgcatcc tctgcctggg aggatcggaa tgcctccgtc gaggaagtcg tcagcagaag
     1381 gaccccttcc ccgccaccac tttcccaatg gactcagggt gtcgctaggg ttgggaaccc
     1441 atgtcccgaa gctcctctcc tgtggaaggt tccgaactcg agaggcggag atgcagcagg
     1501 actgagtagg gacccgtccc tgccagccct gctcccacgg gagtcacctc atcctattga
     1561 aacgcgtagc ccatcgcccg gagagacttg gagtccgatt gcccaggctt catcgacggc
     1621 attgcgtcag gaagctttaa atggtttaac tcagaagctg gagtcgccta caccgtcagc
     1681 acccgggact ccagagctcc cagaggcgca gtgtctgctc tcactggaaa atgcgaatat
     1741 tgccttcaga gacggtcagc cctctccaga tgtagataca acggaacagc cccgaagtca
     1801 tctgacaagc atcctggatg acgatgtgtg cccagaaacc ttgggctcgg gagaagcgac
     1861 ttccggacgt ccgcgcgtga ccattccgcg accgcgagac gtgcgcaaga tggtcaagac
     1921 tacctacgcg ccaagcttcc ctgcagggac cccaggctcc gggcttcccg cgccccctgc
     1981 ggacacctgc ggggaggagg gtgacgtatc caaaacgcaa aagctcccgg cacttgagtc
     2041 gcccgccccg gctcattaca catccatttt tctcaaggac tttctgcctg tggttcctca
     2101 tccctacgag acaccagagc cttcactccc tgcaacccct aaggatgcct cccagtccag
     2161 cggggtcccg aggcggaggg cagagaacag caccgcgaag cctttcgctc gcagtgagat
     2221 ccgcttgcct ggcgctctag ccttcggcca gcggcgagag aaaactccga gtgtccaaag
     2281 accgggtcct ggaggagaaa acccggatgc tgaggcccag agtctggtcc cagaccgcga
     2341 gggtccgacc agccctttag gaggcgctcg cacctcaacc cagcgttccc ctttagagtc
     2401 cacagggacc agaccacctc gccccgggtc cccgcaggcg ggtcccaact ccagccttag
     2461 ggcagcaccc gaattagaga caccgcttgt gtctcctgca actgcggtcc aggcgcccct
     2521 ccttccggat cctccggcga cggcagccag gaccgctgca cccttcccgc gagcggcctc
     2581 cgcgcctccc accgaccggc tccatcctgc atcctccctg gggatgcgca ggcctccggg
     2641 agccgtgccc gcggggaagg tcctggtaga cccggagagc ggccggtact actttgtgga
     2701 ggcgccgagg cagccgaggc tgaggctgct cttcgatccc gagagcgggc agtacgtgga
     2761 agttctgctg ccaccgtcgc cctctccctc ccggccgcca cgccaaccct atgccccgct
     2821 ggccttaggg cccggcctct acccgcccgt ctatgggcct atctctggcc cgtcactgtc
     2881 gccgctgtct cacaatctgc cagcccttgg tggtctccag ctaccttggg ctcctgaggc
     2941 tggatccctg gaggggatgt actacatgcc cttgagcggg acccctagtc cggcaccgcc
     3001 gccgctggcc ttctgtggcc caccccccag ttctggtccc atccagtcca gcaagggttc
     3061 tgtgtttcct ttgtaaaacc ccagccttta tccccgtgga gttgggttcc ctggaaggct
     3121 ttggaagttc cggatcccag actcttaatt tttttctccc gtcaattctt tggccagttc
     3181 cagccggtca ccagaccaga agtggcctta agagaatgta tctgctacct gggctgacag
     3241 tgctggagca tcattagcaa gtgactgcct gcctatcccc cctcggcccc ccaacaaaaa
     3301 tatgtatccc ttccccaaac cttcccaggg tgtgctgtgt ttgtgtatgt gtttacgtag
     3361 gcaagcaagt ctgtcaaagt gagaagccag tctaagaggt gttggggttt cccagaatag
     3421 caggtgtggg agcagcagga cggggctgcc ttggtgaact gtttgtattt ccctaacact
     3481 gggccagttg agtggagcag gagagtaggt gctgctgaga tgggatgggc cacagccatc
     3541 aaatctggat tagtcctaca agggagaacc tagtgtggcc cctgggcagc ctggggcagt
     3601 gaatgggagc tatggggaca gtagttggag atgaagtatg gatgctgcat aaggagatgt
     3661 ggatgtggat tggaggtgag agaactgggt gaaatggctg tagtccctgg aaagacagtc
     3721 aatgggacaa gcagctcctt gacagaaagg cctgcaggag ggtctaggaa atgaggaagg
     3781 ggaggaagat tcttacggtt ttctgtggct tgggggtgac tagggacaag tgatgaatta
     3841 aaaaatctca aggggctggg gatttagctc agtgatagag cgcttaccta ggaagcgcaa
     3901 ggccctgggt tcggtcccca gctccgaaaa aaaaagaacc aaaaaaaaaa atgggggagc
     3961 ttcatgaaat gatgtgacag ccaggtggtg ttggtgtaga cctttgatcc cagcactcgg
     4021 gaagcagaga caggtggatc tctgtgagtt caggaccagc ctacagagcg agttccaaga
     4081 cagagaaatt ctgtctcaaa aacaacaaac caagagatgg ctacagctaa cagcccacag
     4141 cagggaacct agctcctccc tgtcttctac agaccctggg agctgagcta gtttatcctg
     4201 aagccatccc cacctcaata gacaccaagt aaattgaatt accaggagga caagagggaa
     4261 gaaggtcagg ctgtttgggt gagttagagc tggcaagagg aagggtgttc ctagatgagt
     4321 aggtcaaggg gccctggccc tttagctggt ttcactcttc atgttcctcc aggagcagag
     4381 gcaacagtaa ctacacaggg actggccctt ccggctactc ccagcacagg aaagacccca
     4441 aacctgtgct ctagccgctc tgagcctggg gtaaactgag agccagagga caatctctgt
     4501 gaagtagaag gtggtctctg tgttgttttt gagccttgct ggagcggtgt ttgacaggag
     4561 gtgtttgaga aaggatcgtt cccactagaa gcaatgctgg gtagacagac attcggcagc
     4621 tttctggttc tgagcctgtg tagctaagat ccctctctag gagtttctgt caaccttgcc
     4681 ctggactgga aagtggctaa aatacaccgt caaaataacc tcaacatctc tcctgagata
     4741 ctggtcccaa tgacatggag ggaccagggc cagccctaga gtgtatcatc tcgccctggt
     4801 gtgtaataaa tggctaacca tggagagcca tggtgactga aatga
//
