LOCUS       NM_001098793            1391 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus PRKR interacting protein 1 (Prkrip1), mRNA.
ACCESSION   NM_001098793 XM_001070562 XM_573387
VERSION     NM_001098793.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1391)
  AUTHORS   Butte AJ, Sigdel TK, Wadia PP, Miklos DB and Sarwal MM.
  TITLE     Protein microarrays discover angiotensinogen and PRKRIP1 as novel
            targets for autoantibodies in chronic renal disease
  JOURNAL   Mol Cell Proteomics 10 (3), M110.000497 (2011)
   PUBMED   21183621
REFERENCE   2  (bases 1 to 1391)
  AUTHORS   Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta
            R, Wang NS and Knepper MA.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   3  (bases 1 to 1391)
  AUTHORS   Yin Z, Haynie J, Williams BR and Yang YC.
  TITLE     C114 is a novel IL-11-inducible nuclear double-stranded RNA-binding
            protein that inhibits protein kinase R
  JOURNAL   J Biol Chem 278 (25), 22838-22845 (2003)
   PUBMED   12679338
REFERENCE   4  (bases 1 to 1391)
  AUTHORS   Xiao HS, Huang QH, Zhang FX, Bao L, Lu YJ, Guo C, Yang L, Huang WJ,
            Fu G, Xu SH, Cheng XP, Yan Q, Zhu ZD, Zhang X, Chen Z, Han ZG and
            Zhang X.
  TITLE     Identification of gene expression profile of dorsal root ganglion
            in the rat peripheral axotomy model of neuropathic pain
  JOURNAL   Proc Natl Acad Sci U S A 99 (12), 8360-8365 (2002)
   PUBMED   12060780
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DY314400.1, BQ194450.1 and BI303879.1.
            
            On or before Jun 21, 2007 this sequence version replaced
            XM_573387.2, XM_001070562.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158549.1, EV778989.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-647               DY314400.1         1-647
            648-917             BQ194450.1         16-285              c
            918-1391            BI303879.1         1-474               c
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q12"
     gene            1..1391
                     /gene="Prkrip1"
                     /note="PRKR interacting protein 1"
                     /db_xref="GeneID:498171"
                     /db_xref="RGD:1595708"
     exon            1..160
                     /gene="Prkrip1"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..595
                     /gene="Prkrip1"
                     /note="Prkr interacting protein 1 (IL11 inducible)"
                     /codon_start=1
                     /product="PRKR-interacting protein 1"
                     /protein_id="NP_001092263.1"
                     /db_xref="GeneID:498171"
                     /db_xref="RGD:1595708"
                     /translation="MASPAATSVRPPRPKKEPQTLVIPKNAAEEQKLKLERLMKNPDK
                     AVPIPEKMNEWAPRPPPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEK
                     QKLDAEFQKRLEKNKIAAEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQKEEPSQCQE
                     QQTSSSEEASGAEEEEEEPSVVIMGR"
     exon            161..239
                     /gene="Prkrip1"
                     /inference="alignment:Splign:2.1.0"
     exon            240..340
                     /gene="Prkrip1"
                     /inference="alignment:Splign:2.1.0"
     exon            341..426
                     /gene="Prkrip1"
                     /inference="alignment:Splign:2.1.0"
     exon            427..494
                     /gene="Prkrip1"
                     /inference="alignment:Splign:2.1.0"
     exon            495..1381
                     /gene="Prkrip1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggaaagcgt tcgggaagag agaggaaagc tgatatggcg agtcccgctg ccacttctgt
       61 tagaccgccc aggcccaaga aagagccgca gaccctcgtc atccccaaga atgcagccga
      121 ggagcagaag ctcaagctag agcggctcat gaagaacccg gacaaagcag ttccaattcc
      181 agagaaaatg aatgaatggg ctcctcgacc tcctccagaa tttgtccgag atgtcatggg
      241 ttccagtgct ggggctggca gtggagagtt ccacgtgtac aggcacctac gtcggagaga
      301 gtaccagcgg caggactaca tggatgccat ggctgagaag caaaaactgg atgcagagtt
      361 tcagaagaga ctggaaaaga ataagatcgc tgcagaggag cagactgcaa agcgccggaa
      421 gaagcggcag aagttaaaag agaagaagtt actggcaaag aagatgaaac ttgagcagaa
      481 gaaacagaag gaagaaccca gtcagtgcca ggaacagcaa accagcagtt ctgaggaggc
      541 atctggagca gaggaggagg aagaagagcc cagcgtcgtc atcatggggc gatgagtttg
      601 agcagttgtg agcccagctc attctgtgac cagcctcaga aaagaaaagg ctgtatgtga
      661 cccagctgcc agactggctt tgttgggaga aggcaggagc ctcctggagc cctgcctgcc
      721 tgcctgggga gcagagggag ggagcgtccc ttagacattt gcagacattg cctactgtat
      781 cctgccctgc tcttgctgaa ggggagtaag tgcctcacct tcgcctggcg cctgttccct
      841 tctgcttgaa cagcagtgag ctctgggctg gtctctgtga agagaatatt tatttagtaa
      901 agagcagaaa acctataggt cttgtccata cgtgcaagat gtggattacc aaagcctcag
      961 tgaagccatg agatgacaga gatttggcag atcatcttgt gcagaccttc ttctagacct
     1021 actccccagg cacatgggct tggctcttca ggtgcacagc cctgttgttt atgaagcggt
     1081 tggatcggaa gccaaagatc agtgcccacc cagcagttcc taaaacaagt atgagccaga
     1141 cggggccttc agtaagggca ggagagaagg tccaggaaaa ccgagtgtcc cagagaactg
     1201 gaagacagag acacataccg gccaaaagcc ttcctctgtc ctagacagcc cagggaccag
     1261 agagggtaga actcttaggt atcaaaagtc ttcctgtcgg gttggggatt tagctcagtg
     1321 gtagagtgct tgcctagcga gcgcaaggcc ctgggttcgg tccccagctc cggaaaaaaa
     1381 aaaaaaaaaa a
//
