LOCUS       XM_341433               2203 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus primase and DNA directed polymerase
            (Primpol), transcript variant X1, mRNA.
ACCESSION   XM_341433
VERSION     XM_341433.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_341433.9.
            
            On Jan 21, 2021 this sequence version replaced XM_341433.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2203
                     /gene="Primpol"
                     /note="primase and DNA directed polymerase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 4 ESTs, 10 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     76 samples with support for all annotated introns"
                     /db_xref="GeneID:361147"
                     /db_xref="RGD:1562119"
     CDS             229..1833
                     /gene="Primpol"
                     /codon_start=1
                     /product="DNA-directed primase/polymerase protein"
                     /protein_id="XP_341434.3"
                     /db_xref="GeneID:361147"
                     /db_xref="RGD:1562119"
                     /translation="MMGKWESMVKQIEERASHYERKPLSSVYRPRLSKPEEPSSIWKI
                     FHRQNQAFNFVKSCKESVHVFALEHKMGNGQRIYLVTSYAQFWFYYKTRTTLLHCYEV
                     IPENAVCKLYFDLEFNKLANPGADGKEMVALLVQHVCEALQEIYSVHCSAEDVLNLDS
                     STEEKFSRHLIFQLHDVAFKDNTHVGNFVRKILQPALHLITKDDEDEITEAVGHEASC
                     FSVTPLKQEISEAWEKLALPKQCDPDLSFLVVKNHKGEKCLFVDLGVYTKNRNFRLYQ
                     SSKIGKRVSLEVAEDNRFIPKQSKDISEENQYFLSSLVSNVRFSDTLRILSCDPSQTK
                     RKRVEYSNSAGTSVEPIEGFQASPYPEVDRFVLSLVNKPDTEGGIRRWNYFFPEELLV
                     YDICKYRWCENIGRAHKSNNIMILVDLKNEVWYQKCHDPVCKAQNFKSTCFPLPTEVS
                     LLFLLKDEEDFTSGETDEDSNSLTKDFQNPPPCNLSAADWDDGDDACFLEATEDAEFA
                     DAADKSVLGSVDDIPDELIIEALQSS"
ORIGIN      
        1 caggccccgc ccaccgatgg ctcaccctag agccccgccc cctccggccc cgccccctcg
       61 cgggggtttc aagttctggt tcccgccatc tctgcctcca ccatctgccg cctccggccg
      121 acttgcactg cttgaggttt ctgctaaaat tgaagacaaa ggcattaata tagtgattga
      181 cagaaaggtc tctgtggctg ggttcctgct ctccatgctt ctgaagcaat gatggggaaa
      241 tgggagtcaa tggtgaagca gattgaggag cgggcatctc actatgagag gaagccactg
      301 tcttccgtgt acagaccaag actgtccaag ccagaagaac catcctccat ttggaagata
      361 tttcatcgtc agaatcaggc ttttaatttt gttaaaagct gtaaagagag tgttcacgta
      421 tttgctttgg agcacaaaat gggaaatgga caacgtattt accttgtaac atcctatgct
      481 caattttggt tttactataa gacccggaca accctcctgc actgctatga agttattcct
      541 gagaacgctg tgtgcaagct ttattttgat ttggaattta acaaactggc caatccagga
      601 gctgacggga aggagatggt tgcactgctt gtacagcatg tctgtgaagc actgcaggag
      661 atttacagtg ttcactgctc agctgaagat gttctcaacc tggattccag cactgaagaa
      721 aagtttagcc gacacctaat atttcagctc catgatgtgg cgtttaaaga taacactcat
      781 gttggtaatt ttgtgagaaa aattttgcaa cctgctcttc acttaatcac caaggacgat
      841 gaggatgaga tcacagaggc agtgggccat gaagcctcct gtttttctgt tacaccatta
      901 aaacaagaga tttcagaggc ctgggagaag ctggcgttgc ctaagcagtg tgaccccgat
      961 ctttcatttt tagttgtgaa aaatcacaaa ggagaaaaat gtctctttgt ggatctagga
     1021 gtgtatacaa aaaacagaaa ctttcgacta tatcaatcat caaaaatagg aaagcgtgtg
     1081 tctttggagg ttgcagaaga taacagattt attccaaaac agtcaaaaga tatttctgag
     1141 gaaaaccagt atttcctgtc ttccctggtg agcaatgtca gattctcaga cactttacga
     1201 attctctcat gtgacccgtc tcagaccaaa agaaagcggg ttgaatattc taacagtgct
     1261 ggcacttcag tggaacccat tgaaggcttc caggcctccc cgtaccctga ggtcgaccgc
     1321 tttgttcttt ctttggtgaa taaacctgac actgaaggag gaattcggcg ttggaactac
     1381 tttttcccag aagaattgct ggtttatgat atatgtaaat atcgctggtg tgaaaacatt
     1441 ggaagagccc acaagagtaa taatatcatg attctggttg atctgaaaaa tgaagtttgg
     1501 tatcagaaat gccatgaccc tgtatgtaaa gcacaaaact tcaaatctac ctgtttccca
     1561 ctacccactg aagtaagtct cctgtttctt ctgaaagatg aagaagattt cacttctgga
     1621 gaaacagatg aagacagcaa ctcactaacc aaggattttc aaaacccacc accctgcaac
     1681 ttgtctgccg ctgactggga tgacggagat gatgcctgtt tcttagaagc gacagaagat
     1741 gctgaatttg ctgacgctgc agataagagt gttcttggtt cagtggacga tattcctgac
     1801 gagctaatta tagaagcttt acagagcagc tgactgtgga tagaacatac atcatgaggc
     1861 tacaatttgc ctgaaggctg agattcaata acatgaatgt taaattagtg ctgggcctat
     1921 cgccctatgt tagaatatgt acctacgccc tgcatttagt ctcctatatt taacatcaca
     1981 caaaaaccaa attatattac cttattgttc acctgtttat agcaactatt tattacttgg
     2041 ttagcctaaa ccagacttat tacctctgac aggacagtag atgcttctaa ttaaccaaag
     2101 tgattctgtg ctagcatttg cactgctgtc attctgtgct agcatttgca ctgctgtcat
     2161 tcatgagttt attgtaggtt aaaactcttg tgcctggtga tga
//
