LOCUS       XM_039078424            1358 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus DNA primase subunit 1 (Prim1),
            transcript variant X4, mRNA.
ACCESSION   XM_039078424
VERSION     XM_039078424.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1358
                     /gene="Prim1"
                     /note="DNA primase subunit 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 12 ESTs, 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     108 samples with support for all annotated introns"
                     /db_xref="GeneID:246327"
                     /db_xref="RGD:621380"
     CDS             171..1022
                     /gene="Prim1"
                     /codon_start=1
                     /product="DNA primase small subunit isoform X4"
                     /protein_id="XP_038934352.1"
                     /db_xref="GeneID:246327"
                     /db_xref="RGD:621380"
                     /translation="MTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLS
                     SAVRSGIVEYLSLIKGGHDVKKKVHLNEKVHPFVRKSINIIKKYFEEYALVDQDILEN
                     KENWDKILALVPETVHDELQKGFQRFHSSPQRWEYLRKVASAPQNTKNDKCGPWLEWE
                     IMLQYCFPRLDINVSKGVNHLLKSPFSVHPKTGRISVPIDFQKVDQFDPFVVPTISAI
                     CRELDVVSTTEKEKEENETDSRHRVRDYKRTSLAPYVKVFEQFLENLDKSRKGALLKK
                     SDLQKDF"
ORIGIN      
        1 ccgtgaattc tcattcacac tgaaagatga tatttacatt cgctaccagt ccttcaacaa
       61 ccagagtgat ctggaaaagg agatgcagaa aatgaatcca tataagattg atataggtgc
      121 agtatattct cacagattcc gcagacatat gctccaagtg ctggactctc atgacaatgg
      181 ccatgcgcat catagatcgg gcattgaagg aggactttgg atttaagcac cgcctctggg
      241 tgtattcagg aaggagaggt gtacattgtt gggtctgtga tgagtctgtt cgaaagctgt
      301 cctctgctgt tcgctccggg atcgtggagt acttgagtct tataaagggt ggtcacgatg
      361 ttaaaaagaa ggttcaccta aatgagaaag ttcacccttt tgtcagaaaa tctataaaca
      421 taattaaaaa gtactttgaa gaatatgcct tagttgacca agatattctt gaaaataaag
      481 aaaactggga taagatttta gcccttgttc ctgagacagt tcatgatgag ctgcaaaaag
      541 ggtttcagag atttcacagt tcacctcagc gctgggaata cctgaggaaa gtggccagtg
      601 caccacagaa taccaagaat gataagtgtg gcccctggct agaatgggag attatgctcc
      661 agtactgttt cccacgcctg gatatcaacg tcagcaaagg agtcaaccat ttactgaaga
      721 gcccttttag tgttcaccct aagacaggtc gcatttctgt gcctatcgat tttcagaaag
      781 tggatcagtt tgatccattt gttgttccaa ctataagtgc tatctgccgg gaattggatg
      841 tggtttccac cactgagaag gagaaggagg aaaatgaaac tgacagcaga cacagagtca
      901 gagattataa aaggaccagc ctagcaccat acgtgaaagt atttgaacag tttctcgaaa
      961 acctggataa atctcggaaa ggggcacttc tcaagaagag cgatttacaa aaagatttct
     1021 gaagaaaaca accccatcaa accaatgtga atgccttcta cattcaacca tggagcattt
     1081 agtcaatgca gtagaatcgt cagtgtgact gaatccttaa agcagagctt tctttctttt
     1141 ctttcttttt tctttttttc ggagctgggg acgaacccag ggccttgagc ttgttaggca
     1201 agcgctctac cactgagcta aatccccaac ccctcagagc tttcttttga gaaatcattt
     1261 atgtcaaaga gacctggttt ctgagaccaa agagggtgtc aagggccctg aaagaaacaa
     1321 taaatcaagg aataaatgca ctgcaaaagt ctgtaaaa
//
