LOCUS       XM_039078421            1362 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus DNA primase subunit 1 (Prim1),
            transcript variant X1, mRNA.
ACCESSION   XM_039078421
VERSION     XM_039078421.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1362
                     /gene="Prim1"
                     /note="DNA primase subunit 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 22 ESTs, 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     83 samples with support for all annotated introns"
                     /db_xref="GeneID:246327"
                     /db_xref="RGD:621380"
     CDS             80..1330
                     /gene="Prim1"
                     /codon_start=1
                     /product="DNA primase small subunit isoform X1"
                     /protein_id="XP_038934349.1"
                     /db_xref="GeneID:246327"
                     /db_xref="RGD:621380"
                     /translation="MELFDPAELPELLKLYYRRLFPYAQYYRWLNYGGVTKNYFQHRE
                     FSFTLKDDIYIRYQSFNNQSDLEKEMQKMNPYKIDIGAVYSHRPSQHNTVKLGAFQAQ
                     EKELVFDIDMTDYDDVRRCCSSADICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYS
                     GRRGVHCWVCDESVRKLSSAVRSGIVEYLSLIKGGHDVKKKVHLNEKVHPFVRKSINI
                     IKKYFEEYALVDQDILENKENWDKILALVPETVHDELQKGFQRFHSSPQRWEYLRKVA
                     SAPQNTKNDKCGPWLEWEIMLQYCFPRLDINVSKGVNHLLKSPFSVHPKTGRISVPID
                     FQKVDQFDPFVVPTISAICRELDVVSTTEKEKEENETDSRHRVRALGRQRLESIWEFK
                     VSLVNKGSSGPSELHRETLSVSKN"
ORIGIN      
        1 atgcgtgcgc aaccgtggag tcctgtgctg ttcccgccaa ttctcgtgtc agtcctgtct
       61 gggtctagtt ccttacttca tggagctatt tgatcccgcg gagctgccgg agctactcaa
      121 gctttattac cgaagactct ttccttacgc ccagtactat cgttggctca actatggcgg
      181 agtgacaaag aattactttc aacaccgtga attctcattc acactgaaag atgatattta
      241 cattcgctac cagtccttca acaaccagag tgatctggaa aaggagatgc agaaaatgaa
      301 tccatataag attgatatag gtgcagtata ttctcacaga cccagccaac acaacacagt
      361 gaagctgggg gctttccagg ctcaggagaa agaactggtc tttgacattg acatgacaga
      421 ctatgacgac gtaaggagat gctgcagttc cgcagacata tgctccaagt gctggactct
      481 catgacaatg gccatgcgca tcatagatcg ggcattgaag gaggactttg gatttaagca
      541 ccgcctctgg gtgtattcag gaaggagagg tgtacattgt tgggtctgtg atgagtctgt
      601 tcgaaagctg tcctctgctg ttcgctccgg gatcgtggag tacttgagtc ttataaaggg
      661 tggtcacgat gttaaaaaga aggttcacct aaatgagaaa gttcaccctt ttgtcagaaa
      721 atctataaac ataattaaaa agtactttga agaatatgcc ttagttgacc aagatattct
      781 tgaaaataaa gaaaactggg ataagatttt agcccttgtt cctgagacag ttcatgatga
      841 gctgcaaaaa gggtttcaga gatttcacag ttcacctcag cgctgggaat acctgaggaa
      901 agtggccagt gcaccacaga ataccaagaa tgataagtgt ggcccctggc tagaatggga
      961 gattatgctc cagtactgtt tcccacgcct ggatatcaac gtcagcaaag gagtcaacca
     1021 tttactgaag agccctttta gtgttcaccc taagacaggt cgcatttctg tgcctatcga
     1081 ttttcagaaa gtggatcagt ttgatccatt tgttgttcca actataagtg ctatctgccg
     1141 ggaattggat gtggtttcca ccactgagaa ggagaaggag gaaaatgaaa ctgacagcag
     1201 acacagagtc agagcacttg ggaggcagag gctggagagt atctgggagt tcaaggtcag
     1261 cctggtcaac aaagggagtt caggaccgtc ggaactacac agagaaaccc tgtctgtctc
     1321 aaaaaactag aggggctgag acatcagtgc ctctgtccaa ct
//
