LOCUS       NM_001009543            1277 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus PRELI domain containing 3B (Prelid3b), mRNA.
ACCESSION   NM_001009543
VERSION     NM_001009543.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001009543.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC060590.1, FQ213925.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676807 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-81                JAXUCZ010000003.1  183689173-183689253 c
            82-250              JAXUCZ010000003.1  183685671-183685839 c
            251-340             JAXUCZ010000003.1  183684617-183684706 c
            341-411             JAXUCZ010000003.1  183683045-183683115 c
            412-514             JAXUCZ010000003.1  183682837-183682939 c
            515-1277            JAXUCZ010000003.1  183681257-183682019 c
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q43"
     gene            1..1277
                     /gene="Prelid3b"
                     /gene_synonym="Slmo2"
                     /note="PRELI domain containing 3B"
                     /db_xref="GeneID:494346"
                     /db_xref="RGD:1594395"
     exon            1..81
                     /gene="Prelid3b"
                     /gene_synonym="Slmo2"
                     /inference="alignment:Splign:2.1.0"
     CDS             50..637
                     /gene="Prelid3b"
                     /gene_synonym="Slmo2"
                     /note="protein slowmo homolog 2"
                     /codon_start=1
                     /product="PRELI domain containing protein 3B"
                     /protein_id="NP_001009543.1"
                     /db_xref="GeneID:494346"
                     /db_xref="RGD:1594395"
                     /translation="MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPSVVGVDVLDRHVD
                     PSGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPIRRTMELKSTNISFTN
                     MVSVDERLTYKPHPQDPEKTVLTQEALITVKGVSLSSYLEGLMASTISSNANKGREAM
                     EWVIHKLNAEIEELAASARGSIRTPMAAAAALVDK"
     exon            82..250
                     /gene="Prelid3b"
                     /gene_synonym="Slmo2"
                     /inference="alignment:Splign:2.1.0"
     exon            251..340
                     /gene="Prelid3b"
                     /gene_synonym="Slmo2"
                     /inference="alignment:Splign:2.1.0"
     exon            341..411
                     /gene="Prelid3b"
                     /gene_synonym="Slmo2"
                     /inference="alignment:Splign:2.1.0"
     exon            412..514
                     /gene="Prelid3b"
                     /gene_synonym="Slmo2"
                     /inference="alignment:Splign:2.1.0"
     exon            515..1277
                     /gene="Prelid3b"
                     /gene_synonym="Slmo2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcctcactgt ccctggacac tgagggacac cgggcaggcg gctggcacca tgaagatctg
       61 gacttcggag cacgtctttg accatccatg ggaaacagtt actacagctg caatgcagaa
      121 atacccaaac cccatgaacc cgagcgtggt tggtgttgat gtgctggaca gacatgtcga
      181 tccctctgga aagttgcaca gccacagact gctcagcaca gagtggggcc tgccttccat
      241 tgtgaagtct cttattggtg cagcaagaac gaaaacatac gtgcaagagc attctgtagt
      301 tgacccaata agaaggacga tggagctcaa gtccaccaat atctcattta caaatatggt
      361 ctcagtggac gagaggctca cctacaagcc acaccctcag gacccagaga aaactgtctt
      421 aacccaggaa gccctcatca ctgtgaaggg ggtcagcctt agcagctacc ttgaaggact
      481 catggcaagc accatatctt ccaatgctaa caaaggccga gaagcaatgg agtgggtgat
      541 acataaactg aacgctgaga ttgaagagtt ggcagcatca gcaagaggaa gcataaggac
      601 accaatggcg gcggcggcag cattagtgga caaatgacag tggaaattgg tgtgcagcct
      661 cggggcccca ggactgtcaa gctggcatca tatcatttgt tatttaaaag acaattattt
      721 taggtagttt ttttgtttgt ttgttttgtt tttatgagct ggggtaaagc tgtgactttg
      781 gatcaaaaca aaagatccag agtttctaaa tcaaagggat cctctgaggc taggactgag
      841 aggactgact gggagaggct gtgttcatgt gaacagctaa cgggtttgtt gttctttaag
      901 tacttagaag aagtcggtgt tgatctggag tctcttaaag ctcctcatac tggaacacta
      961 cctggctgcg gaccaagcag aacagagccc agccgccctc ctgtccacac agctgcccgc
     1021 tgctgtgaac cagaaccgac tgcatgagga actcacttta caaacagaaa ttgtaaaatt
     1081 ttaagtgaca ttaatttgta taaaataacc tgccctgctg gaaaccagtg tttggatttg
     1141 gttcttaaat gatatttttg gagtgaaaat tagcactaag gtgatatatg actccagcaa
     1201 aaatagtatt ctattgtatt aatgggtact atattgattt gccaaatttt gtgactcagt
     1261 aaaggcattc ccttcct
//
