LOCUS       NM_001109570            1305 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus PRELI domain containing 3A (Prelid3a), mRNA.
ACCESSION   NM_001109570 XM_001073862
VERSION     NM_001109570.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Miliara,X., Garnett,J.A., Tatsuta,T., Abid Ali,F., Baldie,H.,
            Perez-Dorado,I., Simpson,P., Yague,E., Langer,T. and Matthews,S.
  TITLE     Structural insight into the TRIAP1/PRELI-like domain family of
            mitochondrial phospholipid transfer complexes
  JOURNAL   EMBO Rep 16 (7), 824-835 (2015)
   PUBMED   26071602
REFERENCE   3  (bases 1 to 1305)
  AUTHORS   Hasson,S.A., Kane,L.A., Yamano,K., Huang,C.H., Sliter,D.A.,
            Buehler,E., Wang,C., Heman-Ackah,S.M., Hessa,T., Guha,R.,
            Martin,S.E. and Youle,R.J.
  TITLE     High-content genome-wide RNAi screens identify regulators of parkin
            upstream of mitophagy
  JOURNAL   Nature 504 (7479), 291-295 (2013)
   PUBMED   24270810
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CH473971.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001073862.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132278 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.1"
     gene            1..1305
                     /gene="Prelid3a"
                     /gene_synonym="Slmo1"
                     /note="PRELI domain containing 3A"
                     /db_xref="GeneID:690253"
                     /db_xref="RGD:1582858"
     exon            1..71
                     /gene="Prelid3a"
                     /gene_synonym="Slmo1"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..558
                     /gene="Prelid3a"
                     /gene_synonym="Slmo1"
                     /note="protein slowmo homolog 1"
                     /codon_start=1
                     /product="PRELI domain containing protein 3A"
                     /protein_id="NP_001103040.1"
                     /db_xref="GeneID:690253"
                     /db_xref="RGD:1582858"
                     /translation="MKIWSSEHVFGHPWDTVIKAAMRKYPNPMNPCVVGVDVLERSVD
                     GYGRLHSLRLLSTEWGLPGLVRAILGANRTLTYIKERSVVDPAARKMELCSTNITLTN
                     LVSVNERLVYTPHPENPEKTVLTQEAIITVKGISLGSYLESLMATTISSNAKKGWAAI
                     EWIIEHSESAIS"
     exon            72..240
                     /gene="Prelid3a"
                     /gene_synonym="Slmo1"
                     /inference="alignment:Splign:2.1.0"
     exon            241..330
                     /gene="Prelid3a"
                     /gene_synonym="Slmo1"
                     /inference="alignment:Splign:2.1.0"
     exon            331..401
                     /gene="Prelid3a"
                     /gene_synonym="Slmo1"
                     /inference="alignment:Splign:2.1.0"
     exon            402..504
                     /gene="Prelid3a"
                     /gene_synonym="Slmo1"
                     /inference="alignment:Splign:2.1.0"
     exon            505..615
                     /gene="Prelid3a"
                     /gene_synonym="Slmo1"
                     /inference="alignment:Splign:2.1.0"
     exon            616..1305
                     /gene="Prelid3a"
                     /gene_synonym="Slmo1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagcgccga actcgcgccc tgggcctgcg gctgcggcga tgaagatctg gagctcggag
       61 cacgtgttcg gccatccctg ggacacggtg atcaaggcag ccatgcggaa gtaccctaac
      121 ccgatgaacc cgtgcgtggt gggtgtggat gtgctggagc gcagcgtgga tggctatggg
      181 cgcctgcaca gcctacgcct gctcagcacc gaatgggggc tgcctggcct cgtgcgtgcg
      241 attttgggag ccaacaggac cttgacgtac atcaaagagc gctctgtcgt ggatcccgct
      301 gccaggaaaa tggagctgtg ttccaccaat atcacgctca cgaatctggt gtcagtgaat
      361 gagaggttgg tgtacacgcc tcatccagag aaccctgaaa agactgtgct cactcaagaa
      421 gccatcatca ctgtgaaggg gatcagcctt gggagctacc tggaaagtct aatggccacc
      481 acgatatcct ccaatgccaa gaaggggtgg gctgccattg agtggataat tgaacattcc
      541 gagagcgcca taagctaaca ggtctgcacc catgcctggt gacacaaggg gcagtcacag
      601 aaacttctta acctgatgtc tcaccaaaaa gagtcaaaga agaaaggaaa gaaggaagtg
      661 tggacaaata agacgagagg caagtgtgga gtggctcccg ccaagtctgg aagaggtatc
      721 tgctggaatc ctccttgtcc acgataacct cccagtgtag catcaggcca aggcgccagc
      781 tctgcgaggc tgtttgtgag aggctctttc tcgggagtgg cgtggagccc tcgtctgctg
      841 ggctctgctg taggtcctgt gctaggctgt actgcccatg ttggttttaa gcttttattt
      901 gcttctggaa ggagtgtcac ttctttgtgc tggctctgga cactccacca agagaagagc
      961 tcccctttcc tcatgccctg caggctaagc tggggtagat cctgcaaacc ttctctaggg
     1021 gcctggctgt tgtcctctgt tcctggtgac cctatgtcct ttatagtgtc ccacttgcct
     1081 ctgggaagga gaatgagaaa ttgctctcta gccctcaggg tccccatcat gcactgcatc
     1141 caaaaacagt tcaggagctc tctacacagg ccactatgag ttccagcagc aactgggatt
     1201 ttcaaactca aaactggcct tgaactctgt gtgactgaag atggtcttga actcttcctc
     1261 ctgcttcccc attcccaagt cctgagatta cagacttggg ccgca
//
