LOCUS       XM_006255244            1067 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus peroxiredoxin 2 (Prdx2), transcript
            variant X1, mRNA.
ACCESSION   XM_006255244
VERSION     XM_006255244.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006255244.3.
            
            On Jan 21, 2021 this sequence version replaced XM_006255244.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1067
                     /gene="Prdx2"
                     /gene_synonym="Tdpx1"
                     /note="peroxiredoxin 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 96 ESTs, 157 long
                     SRA reads, 25 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 222
                     samples with support for all annotated introns"
                     /db_xref="GeneID:29338"
                     /db_xref="RGD:3838"
     CDS             239..835
                     /gene="Prdx2"
                     /gene_synonym="Tdpx1"
                     /codon_start=1
                     /product="peroxiredoxin-2 isoform X1"
                     /protein_id="XP_006255306.1"
                     /db_xref="GeneID:29338"
                     /db_xref="RGD:3838"
                     /translation="MASGNAHIGKPAPDFTATAVVDGAFKEIKLSDYRGKYVVLFFYP
                     LDFTFVCPTEIIAFSDHAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIP
                     LLADVTKSLSQNYGVLKNDEGIAYRGLFIIDAKGVLRQITVNDLPVGRSVDEALRLVQ
                     AFQYTDEHGEVCPAGWKPGSDTIKPNVDDSKEYFSKHN"
ORIGIN      
        1 gcccacctcc ccgcgccctg cctgctgtgg tttgggccac gcataaaagg ctcccgggcc
       61 tagggctctc tcggttctga gatctctttc ctgtctctgc tcgtgtctgg tcgtccgcgt
      121 gtccggctct tgcccacgca gtgtctaggc ttagcaccaa aagtgacctt gggaaggcaa
      181 gacaaagggt cttctgaagc actaaagacc aagcttgcat gggtctctga tttcagtcat
      241 ggcctccggc aacgcgcaca tcggaaagcc tgcccctgac ttcacggcca ccgccgtggt
      301 ggatggtgcc tttaaggaaa tcaagctttc agactacaga gggaagtacg tggtcctctt
      361 tttctatcca ctggacttca cttttgtttg ccccacggag atcatcgctt ttagcgacca
      421 cgctgaggac ttccgaaagc taggctgcga ggtgctggga gtgtctgtgg actctcagtt
      481 cacccacctg gcctggatca ataccccacg gaaggaggga ggcttgggcc cactgaatat
      541 ccctctgctt gctgatgtga ctaaaagctt gtcccagaat tacggcgtgt tgaaaaatga
      601 tgagggcatc gcttacaggg gcctctttat catcgatgcc aagggtgtcc ttcgccagat
      661 cacagtcaac gacctacctg tgggacgctc tgtagatgag gctctccgcc tcgtccaggc
      721 ctttcagtat acagatgagc atggggaagt ctgtcctgct ggctggaagc ccggcagtga
      781 caccatcaaa cccaatgtgg atgacagcaa ggaatacttc tccaaacaca actgagatgg
      841 gtaaacatcg gtgagcctga atcccggatc tcacctgcgc ccttacctgg atgtcctgtg
      901 ctggcccaga aaacgctaga tcttcctcta cattctaaag gggctggagg ctaggccgag
      961 gctttctcat tacccacctg gaatctggtg aatagtgacc ctgccctgag cacacccagc
     1021 tgggcccagg tctataggaa accaataaag tattagggac agtgtaa
//
