LOCUS       XM_039110918            1959 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus PR/SET domain 14 (Prdm14), mRNA.
ACCESSION   XM_039110918
VERSION     XM_039110918.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1959
                     /gene="Prdm14"
                     /note="PR/SET domain 14; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 43% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:100365184"
                     /db_xref="RGD:2319590"
     CDS             280..1959
                     /gene="Prdm14"
                     /codon_start=1
                     /product="PR domain zinc finger protein 14"
                     /protein_id="XP_038966846.1"
                     /db_xref="GeneID:100365184"
                     /db_xref="RGD:2319590"
                     /translation="MALSPSRETQSQDRVNYLPQSSPQHLTTYYAPVPGYSHFGNLAT
                     TEEDFQPWKLTAAVFESQAMAQLNAFRMTPPLLNPSLAVQSEPLYNLPWYKLSPWYSI
                     PQFTPEVPQFLDSTKHENGGSSSENSVPVGGQINRGQLWGAENLLLPSPVLALLPDGI
                     KTSHSISVPQTLNQDGKLSFRGFSFTEEELRFVLYGAIASPEHPSGLQHAISGILVPT
                     ESSGSSHLRKTLDKDSLQLPEGLCLMQTAFGDAPHFGVFCSNFIAKGVRFGPFQGKVV
                     NASEVKTHRDNSRMWEIFEDGHLSHFIDGKGSGNWMSYVNCARFPEEQNLAAVQHQDQ
                     IFYESCKDIHQNQELLVWYGNCYEKFLDIPMSLQVTEQEGKQLSEPCEESAEGYRCER
                     CGKVFTYRYYRDKHLKYTPCVDKGDRKFPCSLCQRSFEKRDRLRIHILHVHERHRPYL
                     CSTCGKSFSQSSSLNKHMRVHSGDRPYQCVYCTKKFTASSILRTHIRQHSGEKPFKCK
                     HCGKAFASHAAHDSHVRRSHKEDGRSSCNICGKGFLDQEAFYAHVKLHKTC"
ORIGIN      
        1 agaaggcgac ctgagccagc accttccagt cgggcgacac cgagacagat tttcgttaga
       61 ggtttgagat gtttgacttt ttgttttatt ttggtttggt ttggtgtggg gatttgtacg
      121 ttttgtgtta tttttttttt cgagttagat aatttgcggg atcgaattgg gaagtttgtt
      181 cgttgacttt gattgggggg aaggggagta gttaagacca cctaggaccc ctcactcagc
      241 gacctcggtt tcccacagat cggtaaaatt catcttgaga tggccttatc gccttctcgc
      301 gagacccagt cccaggacag ggtgaactac ctgccccaga gtagccccca gcacctgact
      361 acctactatg cgcctgtccc aggctacagc cacttcggga acctcgccac caccgaggag
      421 gattttcagc cttggaaact gacggctgca gtgtttgagt cccaggcaat ggcccagctt
      481 aatgcttttc ggatgactcc tcccttgttg aacccgagtc tggctgtgca gagcgagccg
      541 ctctacaatc tgccctggta caagttgtca ccatggtatt caattcctca attcactcct
      601 gaggtaccac aatttctaga cagcactaag catgagaacg gcggttccag cagcgaaaat
      661 tcggtcccag tcggcggcca aatcaacaga ggccagttgt ggggagctga aaatttactt
      721 ctgccgtccc cggtacttgc tctactacct gatggaatta agacttccca ctcaatatct
      781 gtcccccaaa ccttgaacca agacgggaag ctgtcttttc gcggcttcag cttcacagag
      841 gaggaactgc gcttcgttct gtatggagcc atcgctagtc cggagcaccc atctggccta
      901 cagcacgcaa tttcaggcat cctggtcccc acagagagtt ctgggtcaag tcatcttcga
      961 aaaactctgg acaaagactc ccttcagctt ccggaaggtc tctgcctcat gcagacagct
     1021 tttggtgatg ccccacactt tggtgtgttc tgtagtaact tcattgccaa aggagtgaga
     1081 tttggaccct ttcaaggtaa agtggtcaat gccagcgaag tgaagacaca cagggacaat
     1141 tctcggatgt gggaaatttt tgaagatggt cacctgagcc attttatcga tggcaaaggt
     1201 tccgggaatt ggatgtccta tgtcaactgt gctcgattcc ccgaggagca gaacctggcc
     1261 gcagtgcagc accaggacca gatattttac gagagctgta aagacatcca ccagaaccag
     1321 gagctgcttg tgtggtatgg aaattgctac gagaagtttc tggacattcc catgagcctc
     1381 caggtcactg agcaagaagg caaacagcta tctgagccct gtgaggagtc tgcggaaggc
     1441 tacagatgcg aacgctgtgg gaaggtgttc acctacagat actacagaga taagcacctc
     1501 aagtacactc cctgtgtgga caagggggat aggaagtttc catgctctct ctgccaaaga
     1561 tcctttgaaa agcgtgaccg actccggatc cacatccttc acgtacacga gaggcaccgg
     1621 ccctacctgt gttcaacgtg tgggaaaagc ttctcacagt cttccagcct gaacaagcac
     1681 atgagagtcc actctggaga caggccgtac cagtgtgtgt actgcacgaa gaagttcacc
     1741 gcctccagca tactccggac acacattaga cagcactctg gggagaagcc cttcaagtgc
     1801 aaacactgtg gtaaagcttt cgcatcccac gctgcccatg acagccacgt ccggcgctca
     1861 cacaaggagg atggccggag ctcctgcaat atttgtggga aaggcttcct ggatcaagag
     1921 gctttctatg cccatgtgaa gcttcacaaa acctgctag
//
