LOCUS       XM_001067974            1548 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus PR/SET domain 12 (Prdm12), mRNA.
ACCESSION   XM_001067974
VERSION     XM_001067974.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 19, 2024 this sequence was replaced by
            NM_001427361.1.
            
            On Jan 21, 2021 this sequence version replaced XM_001067974.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1548
                     /gene="Prdm12"
                     /note="PR/SET domain 12; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 4 Proteins, and 60% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:688699"
                     /db_xref="RGD:1586401"
     CDS             1..1098
                     /gene="Prdm12"
                     /codon_start=1
                     /product="PR domain zinc finger protein 12"
                     /protein_id="XP_001067974.2"
                     /db_xref="GeneID:688699"
                     /db_xref="RGD:1586401"
                     /translation="MMGSVLPAEALVLKTGLKAPGLALAEVITSDILHSFLYGRWRNV
                     LGEQLLEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPVEVIIAQSSIPGEGLGI
                     FSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSW
                     MTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPGL
                     EEEQKKNKHEDFHPADSATGTAGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFC
                     NRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQKSARHRPPSTALQAHS
                     PALPAPHAHAPALAAAAAAAAAAHHLPAMVL"
ORIGIN      
        1 atgatgggct ctgtgctccc agctgaggcc ctggtgctca aaacagggct gaaggctccg
       61 gggctagcgt tggcagaggt catcacctcc gacatcctgc acagtttctt atatggccga
      121 tggcgcaacg tgctaggcga acagctgctc gaggacaaga gccaccatgc cagcccaaag
      181 actgccttca ccgccgaggt cttggcacag tccttctcgg gagaggtgca gaagctatct
      241 agcctggtgc tgccggtgga agtgatcatc gcccagagtt ccatccctgg cgagggcctt
      301 ggcatcttct ccaagacgtg gatcaaggca ggcacggaga tgggcccctt cactggccga
      361 gtcatcgccc cagagcatgt ggatatctgc aaaaacaaca acctgatgtg ggaggtattc
      421 aacgaggatg ggacagtccg ctactttatc gatgccagcc aggaagacca ccgaagctgg
      481 atgacctaca tcaagtgtgc ccggaacgag caggagcaga acctggaggt ggtgcagata
      541 ggcactagca tcttctacaa ggccatagag atgatccctc cagaccagga gctgctggtg
      601 tggtatggga attcccacaa cacctttctg gggatcccag gtgtgccggg actggaagaa
      661 gaacagaaga aaaacaagca tgaggacttc cacccggccg actccgcgac cggtaccgcg
      721 ggccgcatgc gctgcgtcat ctgccaccgc ggcttcaact cgcgcagcaa cctgcgctcg
      781 cacatgcgta tccacacgct ggacaagccc ttcgtgtgcc gcttctgcaa ccgccgcttc
      841 agccagtcgt ccacgctgcg caaccacgtg cgcctgcaca cgggcgagcg tccctacaag
      901 tgccaggtgt gccagagcgc ttattcgcag ctggccggcc tgcgcgcgca ccagaagagc
      961 gcgcgccacc ggccacccag caccgcgctg caggcgcact cgcccgcgct acccgcgcct
     1021 cacgctcacg cgcctgcgct cgccgccgcg gccgccgctg ccgccgcggc gcatcacctg
     1081 ccagccatgg tgctgtgagc gccgcgtacg cgtcccacgc gcacgcgcac ccccgccgcc
     1141 cgtgcgacgg acccgacccc ccgcgccacc gaggcgcccg caacccggaa cccactcctg
     1201 atccatctca cagaggagga cgccgaaggg cgacgtcctc tttgcctagg ccacccggct
     1261 ggtgtggctg ctgccctgtc ctctcttctt gggagccggt cctcacgccc ggccccatct
     1321 cggagtgtcc ctcctgcagg gctgcgtccc cacgcggaca tctctctcct ggatgacagg
     1381 agatggggga cagaggacct ccaaagagag ctgaatagtt gggagtggaa gagagagcta
     1441 cctccttggc ccagggtgga cctggggcag gctgtgctca tctctgcatc attcaaggga
     1501 atggtgtctt gatgtgttgc gagtgtggga acgacgctaa cccttggc
//
